Sequence 1: | NP_001369108.1 | Gene: | Fili / 5740472 | FlyBaseID: | FBgn0085397 | Length: | 789 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001076323.1 | Gene: | lingo3a / 567293 | ZFINID: | ZDB-GENE-060503-54 | Length: | 605 | Species: | Danio rerio |
Alignment Length: | 401 | Identity: | 119/401 - (29%) |
---|---|---|---|
Similarity: | 191/401 - (47%) | Gaps: | 38/401 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 LLLLLLTLVILPPETTAFCPSKCQCLGGEANSRA-LCVDAALEDVPIQLNPETKYINLTVNRIRT 87
Fly 88 LEFS-LPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLLLDL 151
Fly 152 SFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWHLH 216
Fly 217 ALKSLDMSLNLVEFVRNDSFEGLKELLALSV-QGNVMSELDLSAFEGLISLKHLDLSDNNLTMVP 280
Fly 281 TQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFVDNTHLQTLHLN 345
Fly 346 NNPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQF-PVDQLQKLYLGDNPLQCNCSLLW-LWR 408
Fly 409 LVTGNFEGVDP 419 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Fili | NP_001369108.1 | leucine-rich repeat | 75..97 | CDD:275378 | 6/22 (27%) |
leucine-rich repeat | 98..121 | CDD:275380 | 10/22 (45%) | ||
LRR_8 | 120..180 | CDD:404697 | 21/59 (36%) | ||
leucine-rich repeat | 122..145 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 146..169 | CDD:275380 | 8/22 (36%) | ||
LRR | <161..>354 | CDD:227223 | 47/193 (24%) | ||
leucine-rich repeat | 170..193 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 194..217 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 218..265 | CDD:275380 | 9/47 (19%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 314..338 | CDD:275380 | 5/23 (22%) | ||
LRR_8 | 337..397 | CDD:404697 | 14/60 (23%) | ||
leucine-rich repeat | 339..360 | CDD:275380 | 5/20 (25%) | ||
lingo3a | NP_001076323.1 | LRRNT | 27..60 | CDD:214470 | 10/35 (29%) |
LRR | <49..357 | CDD:227223 | 92/334 (28%) | ||
leucine-rich repeat | 58..81 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 82..105 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 130..153 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 154..177 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 178..201 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 202..225 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 226..249 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 250..273 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 274..297 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 298..321 | CDD:275380 | 7/34 (21%) | ||
leucine-rich repeat | 322..342 | CDD:275380 | 7/33 (21%) | ||
PCC | 326..>392 | CDD:188093 | 23/63 (37%) | ||
Ig | 424..492 | CDD:325142 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |