Sequence 1: | NP_001369108.1 | Gene: | Fili / 5740472 | FlyBaseID: | FBgn0085397 | Length: | 789 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005174327.1 | Gene: | lingo1a / 564943 | ZFINID: | ZDB-GENE-080327-16 | Length: | 615 | Species: | Danio rerio |
Alignment Length: | 410 | Identity: | 126/410 - (30%) |
---|---|---|---|
Similarity: | 197/410 - (48%) | Gaps: | 52/410 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 PVLLLLLLTLVILPPETTAFCPSKCQCLGGEANSRALCVDAALEDVPIQLNPETKYINLTVNRIR 86
Fly 87 TL---EFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLL 148
Fly 149 LDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLW 213
Fly 214 HLHALKSLDM-SLNLVEFVRNDSFEGLKELLALSVQG-NVMSELDLSAFEGLISLKHLDLSDNNL 276
Fly 277 TMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHL--SRLDFLQRIDSRAFVDNTHL 339
Fly 340 QTLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQF-PVDQLQKLYLGDNPLQCNCSL 403
Fly 404 LWL----WRLVTGNFEGVDP 419 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Fili | NP_001369108.1 | leucine-rich repeat | 75..97 | CDD:275378 | 9/24 (38%) |
leucine-rich repeat | 98..121 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 120..180 | CDD:404697 | 20/59 (34%) | ||
leucine-rich repeat | 122..145 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 146..169 | CDD:275380 | 8/22 (36%) | ||
LRR | <161..>354 | CDD:227223 | 51/196 (26%) | ||
leucine-rich repeat | 170..193 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 194..217 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 218..265 | CDD:275380 | 12/48 (25%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 314..338 | CDD:275380 | 7/25 (28%) | ||
LRR_8 | 337..397 | CDD:404697 | 14/60 (23%) | ||
leucine-rich repeat | 339..360 | CDD:275380 | 2/20 (10%) | ||
lingo1a | XP_005174327.1 | LRRNT | 34..68 | CDD:214470 | 13/36 (36%) |
LRR_RI | <55..231 | CDD:238064 | 59/178 (33%) | ||
leucine-rich repeat | 66..89 | CDD:275380 | 9/24 (38%) | ||
LRR_8 | 88..148 | CDD:290566 | 21/59 (36%) | ||
leucine-rich repeat | 90..113 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 114..137 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 136..196 | CDD:290566 | 18/59 (31%) | ||
leucine-rich repeat | 138..185 | CDD:275380 | 14/46 (30%) | ||
LRR_8 | 184..241 | CDD:290566 | 19/57 (33%) | ||
leucine-rich repeat | 186..209 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 210..257 | CDD:275380 | 12/48 (25%) | ||
leucine-rich repeat | 234..256 | CDD:275380 | 2/21 (10%) | ||
LRR_8 | 257..316 | CDD:290566 | 17/58 (29%) | ||
leucine-rich repeat | 258..281 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 282..305 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 305..364 | CDD:290566 | 21/86 (24%) | ||
leucine-rich repeat | 306..329 | CDD:275380 | 7/25 (28%) | ||
leucine-rich repeat | 330..350 | CDD:275380 | 8/44 (18%) | ||
TPKR_C2 | 362..>398 | CDD:301599 | 14/29 (48%) | ||
I-set | 421..507 | CDD:254352 | |||
Ig | 432..507 | CDD:299845 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E33208_3BH3X | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |