DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fili and zgc:153913

DIOPT Version :10

Sequence 1:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_001073448.1 Gene:zgc:153913 / 559700 ZFINID:ZDB-GENE-061103-397 Length:496 Species:Danio rerio


Alignment Length:553 Identity:134/553 - (24%)
Similarity:220/553 - (39%) Gaps:126/553 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LCGAIPVLLLLLLTLVILPPETTAFCPSKCQCLGGEANSRALCVDAALEDVPIQLNPETKYINLT 81
            ||.   |:||:|:.|.     ....||..|||..|   |:.:|.|..::.:|:.::.:.:.:.:.
Zfish     4 LCA---VVLLVLIHLY-----CGVCCPEPCQCFSG---SKLVCSDDRMKSLPVNISTQVRELIVV 57

  Fly    82 VNRIRTL-EFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLV-SSLHKHAFKGLT 144
            .:.|..| :.|.|..::|..|.....:::::..:.||...|||.|.:|.|:. .||....|..||
Zfish    58 ASGIPDLDQQSFPETLRLSKLVFLNGMLKSVSGEAFERLVELRELEISGNICWMSLDIQTFSSLT 122

  Fly   145 NLLLLDLSFNRIETV----------------HPTALSDLAS--------LVELDLTNNNIVSLED 185
            ||..|.|:.|::..|                ....||.|:.        |.||||:.|.|.||..
Zfish   123 NLTRLLLNNNKLSGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQRLHRLQELDLSFNQISSLST 187

  Fly   186 NCFKGMNTLEVLVFRNNRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGN 250
            ..|:..:.|.||..:.|::.::|.....||..|:.|::..||:..:...||..  .|..|.::.|
Zfish   188 ELFQNNSELRVLSLQANKIPNLPDGIFTHLDHLQELNLRSNLIRVLTPGSFPA--SLKTLILKKN 250

  Fly   251 VMSELDLSAFEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLR 315
            ::.:|..:.|..|..:.:||||.|:||.||......|.:|..|:|..||.|.|....|..||.::
Zfish   251 LLEKLTNAVFHTLHYITYLDLSQNSLTEVPADLFQNLISLETLDLSENRISTLAGSVFKGLFSIK 315

  Fly   316 ELHLSRLDFLQRIDSRAFVDNTHLQTLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSA 380
            .::|.: :.|..:|:....|...||.|.|:|| .|..||...|           :....|.::. 
Zfish   316 SVYLQK-NSLISVDAHLLKDQHDLQLLDLSNN-SLRSIPSGFF-----------EDLDFQCVFE- 366

  Fly   381 QFPVDQLQKLYLGDNPLQCNCSLLWLWRLVTGNFEGVDPGMEHAAGGAVAALAKEADDEELADEA 445
                       |..||..|:|.:.:.:..:..|                                
Zfish   367 -----------LRGNPWSCDCGIHYFYDWLKYN-------------------------------- 388

  Fly   446 TAVASTDDGVAALAAYIAEQHIVNALHTTEPSAYELATSSSNRNSGILRMDRQQIGCDIWRDKVR 510
                              .:| |..|......|.||....:.|:     :||:|:.|.  |:...
Zfish   389 ------------------HKH-VKDLSRVSCEAPELIQGHNLRS-----VDREQLVCS--RNSSS 427

  Fly   511 TRRKLLTMSEGEITCPAH----IVTVVCAVITC 539
            ...:::::.||.|.|...    ..::.|.|..|
Zfish   428 NSPEMISVDEGSIQCSVQELKGTASIECKVTKC 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FiliNP_001369108.1 LRR 71..>348 CDD:443914 86/302 (28%)
leucine-rich repeat 75..97 CDD:275378 4/22 (18%)
leucine-rich repeat 98..121 CDD:275380 4/22 (18%)
leucine-rich repeat 122..145 CDD:275380 9/23 (39%)
leucine-rich repeat 146..169 CDD:275380 8/38 (21%)
leucine-rich repeat 170..193 CDD:275380 10/22 (45%)
leucine-rich repeat 194..217 CDD:275380 7/22 (32%)
leucine-rich repeat 218..265 CDD:275380 12/46 (26%)
leucine-rich repeat 266..289 CDD:275380 10/22 (45%)
leucine-rich repeat 290..313 CDD:275380 9/22 (41%)
leucine-rich repeat 314..338 CDD:275380 4/23 (17%)
LRR_8 337..397 CDD:404697 13/59 (22%)
leucine-rich repeat 339..360 CDD:275380 10/20 (50%)
zgc:153913NP_001073448.1 leucine-rich repeat 75..98 CDD:275380 4/22 (18%)
LRR <142..>352 CDD:443914 63/213 (30%)
leucine-rich repeat 148..171 CDD:275380 3/22 (14%)
leucine-rich repeat 172..195 CDD:275380 10/22 (45%)
leucine-rich repeat 196..219 CDD:275380 7/22 (32%)
leucine-rich repeat 220..241 CDD:275380 6/22 (27%)
leucine-rich repeat 242..265 CDD:275380 6/22 (27%)
leucine-rich repeat 266..289 CDD:275380 10/22 (45%)
leucine-rich repeat 290..313 CDD:275380 9/22 (41%)
leucine-rich repeat 314..337 CDD:275380 4/23 (17%)
leucine-rich repeat 338..359 CDD:275380 10/32 (31%)
PCC 342..>427 CDD:188093 26/166 (16%)

Return to query results.
Submit another query.