Sequence 1: | NP_001369108.1 | Gene: | Fili / 5740472 | FlyBaseID: | FBgn0085397 | Length: | 789 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001340791.1 | Gene: | lgr4 / 558825 | ZFINID: | ZDB-GENE-111013-1 | Length: | 971 | Species: | Danio rerio |
Alignment Length: | 404 | Identity: | 110/404 - (27%) |
---|---|---|---|
Similarity: | 183/404 - (45%) | Gaps: | 64/404 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 38 TTAFCPSKCQCLGGEANSRALCVDAALEDVPIQLNPETKYINLTVNRIRTLEFSLPFYMKLEILD 102
Fly 103 LSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLLLDLSFNRIETVHPTALSDL 167
Fly 168 ASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWHLHALKSLDMSLNLVEFVR 232
Fly 233 NDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGG 297
Fly 298 NRFSQLPAVAFLNLFHLRELHL--SRLDFLQRIDSRAFVDNTHLQTLHLNNNPQLSD-------- 352
Fly 353 --------------IPMRLFQGNPNILEVYMQSNSLQTLYSAQFPVDQLQKLYLGDNPLQCNCSL 403
Fly 404 LWLWRLVTGNFEGV 417 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Fili | NP_001369108.1 | leucine-rich repeat | 75..97 | CDD:275378 | 3/21 (14%) |
leucine-rich repeat | 98..121 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 120..180 | CDD:404697 | 22/59 (37%) | ||
leucine-rich repeat | 122..145 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 146..169 | CDD:275380 | 9/22 (41%) | ||
LRR | <161..>354 | CDD:227223 | 60/216 (28%) | ||
leucine-rich repeat | 170..193 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 194..217 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 218..265 | CDD:275380 | 13/46 (28%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 314..338 | CDD:275380 | 8/25 (32%) | ||
LRR_8 | 337..397 | CDD:404697 | 17/81 (21%) | ||
leucine-rich repeat | 339..360 | CDD:275380 | 7/42 (17%) | ||
lgr4 | NP_001340791.1 | LRR 1 | 58..82 | 7/43 (16%) | |
leucine-rich repeat | 64..85 | CDD:275380 | 6/40 (15%) | ||
LRR_8 | 84..144 | CDD:316378 | 23/62 (37%) | ||
LRR 2 | 84..106 | 8/24 (33%) | |||
leucine-rich repeat | 86..109 | CDD:275380 | 9/25 (36%) | ||
LRR 3 | 107..130 | 9/22 (41%) | |||
leucine-rich repeat | 110..133 | CDD:275380 | 9/22 (41%) | ||
LRR 4 | 131..154 | 8/22 (36%) | |||
leucine-rich repeat | 134..157 | CDD:275380 | 8/22 (36%) | ||
LRR | 137..>452 | CDD:227223 | 72/269 (27%) | ||
LRR 5 | 156..178 | 8/21 (38%) | |||
leucine-rich repeat | 158..181 | CDD:275380 | 9/22 (41%) | ||
LRR 6 | 179..202 | 5/22 (23%) | |||
leucine-rich repeat | 182..205 | CDD:275380 | 6/22 (27%) | ||
LRR 7 | 204..226 | 5/21 (24%) | |||
leucine-rich repeat | 206..229 | CDD:275380 | 7/22 (32%) | ||
LRR 8 | 227..250 | 9/23 (39%) | |||
leucine-rich repeat | 230..252 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 251..308 | CDD:316378 | 17/59 (29%) | ||
LRR 9 | 251..273 | 6/21 (29%) | |||
leucine-rich repeat | 253..276 | CDD:275380 | 6/22 (27%) | ||
LRR 10 | 275..297 | 8/24 (33%) | |||
leucine-rich repeat | 277..298 | CDD:275380 | 8/23 (35%) | ||
LRR 11 | 299..321 | 4/21 (19%) | |||
LRR 12 | 322..344 | 3/21 (14%) | |||
LRR 13 | 345..366 | 4/20 (20%) | |||
leucine-rich repeat | 348..369 | CDD:275380 | 6/21 (29%) | ||
LRR 14 | 367..390 | 7/32 (22%) | |||
leucine-rich repeat | 370..393 | CDD:275380 | 7/31 (23%) | ||
LRR 15 | 391..414 | 0/1 (0%) | |||
leucine-rich repeat | 394..415 | CDD:275380 | |||
LRR 16 | 416..438 | ||||
leucine-rich repeat | 418..438 | CDD:275380 | |||
7tmA_LGR4 | 527..811 | CDD:320483 | |||
TM helix 1 | 528..554 | CDD:320483 | |||
TM helix 2 | 562..587 | CDD:320483 | |||
TM helix 3 | 607..637 | CDD:320483 | |||
TM helix 4 | 649..679 | CDD:320483 | |||
TM helix 5 | 698..727 | CDD:320483 | |||
TM helix 6 | 736..766 | CDD:320483 | |||
TM helix 7 | 779..804 | CDD:320483 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |