Sequence 1: | NP_001369108.1 | Gene: | Fili / 5740472 | FlyBaseID: | FBgn0085397 | Length: | 789 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001102659.1 | Gene: | Lingo4 / 499668 | RGDID: | 1562025 | Length: | 618 | Species: | Rattus norvegicus |
Alignment Length: | 561 | Identity: | 161/561 - (28%) |
---|---|---|---|
Similarity: | 238/561 - (42%) | Gaps: | 88/561 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 ATTRSRPWLCGAIPVLLLLLLTLVILPPETTAFCPSKCQCLGGEANSRA-LCVDAALEDVPIQLN 72
Fly 73 PETKYINLTVNRIRTLEFSLPFYM-KLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLH 136
Fly 137 KHAFKGLTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRN 201
Fly 202 NRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSV-QGNVMSELDLSAFEGLIS 265
Fly 266 LKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLDFLQRIDS 330
Fly 331 RAFVDNTH-LQTLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQFP-VDQLQKLYLG 393
Fly 394 DNPLQCNCSLLWLWRLVTGNFEGVDP----GMEHAAGGAV----------------AALAKEADD 438
Fly 439 EELADE---ATAVASTDDGVAALAAYIAEQHI----VNALHTTEPSAYELATSSSNRNSGILRMD 496
Fly 497 RQQIGCDI----WRDKVRTRRKLL-------TMSEGEITCP 526 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Fili | NP_001369108.1 | leucine-rich repeat | 75..97 | CDD:275378 | 5/22 (23%) |
leucine-rich repeat | 98..121 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 120..180 | CDD:404697 | 21/59 (36%) | ||
leucine-rich repeat | 122..145 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 146..169 | CDD:275380 | 9/22 (41%) | ||
LRR | <161..>354 | CDD:227223 | 58/194 (30%) | ||
leucine-rich repeat | 170..193 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 194..217 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 218..265 | CDD:275380 | 11/47 (23%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 314..338 | CDD:275380 | 9/23 (39%) | ||
LRR_8 | 337..397 | CDD:404697 | 18/61 (30%) | ||
leucine-rich repeat | 339..360 | CDD:275380 | 3/20 (15%) | ||
Lingo4 | NP_001102659.1 | leucine-rich repeat | 87..110 | CDD:275380 | 5/22 (23%) |
LRR_8 | 88..145 | CDD:290566 | 18/56 (32%) | ||
LRR_4 | 88..126 | CDD:289563 | 12/37 (32%) | ||
LRR_RI | 110..345 | CDD:238064 | 76/236 (32%) | ||
leucine-rich repeat | 111..134 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 134..193 | CDD:290566 | 21/58 (36%) | ||
leucine-rich repeat | 135..158 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 159..182 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 182..237 | CDD:290566 | 16/54 (30%) | ||
leucine-rich repeat | 183..206 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 207..230 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 231..254 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 255..302 | CDD:275380 | 15/47 (32%) | ||
LRR_8 | 278..334 | CDD:290566 | 22/55 (40%) | ||
leucine-rich repeat | 303..326 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 326..385 | CDD:290566 | 27/85 (32%) | ||
leucine-rich repeat | 327..348 | CDD:275380 | 10/25 (40%) | ||
leucine-rich repeat | 351..374 | CDD:275380 | 11/44 (25%) | ||
IG_like | 445..526 | CDD:214653 | 16/88 (18%) | ||
Ig | 456..526 | CDD:299845 | 14/77 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1280 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.010 |