DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fili and caps

DIOPT Version :10

Sequence 1:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_001303391.1 Gene:caps / 39493 FlyBaseID:FBgn0023095 Length:811 Species:Drosophila melanogaster


Alignment Length:887 Identity:224/887 - (25%)
Similarity:345/887 - (38%) Gaps:225/887 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TRVTATTRS-RPWLCGAIPVLLLLLLTLVI--LPPET-TAFCPSKCQCLGGEANSRALCVDAALE 65
            :|..|.|.| .|.|..|..:.|.|.|.||:  ||... .|.||:.|:|  .:......|.:..|:
  Fly     2 SRRRAITMSLAPHLGQAFSLCLCLCLCLVLATLPVALGLANCPNGCEC--DDDTLMVNCGEGTLD 64

  Fly    66 DVPIQLNPETKYINLTVNRIRTLEFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRN 130
            .:||.|||..:.:.:..|:::|::.|:.||.:|..||||.|.:.|:..::|.|.::|:.|:|..|
  Fly    65 VLPIALNPAIQRLVIKNNKLKTIDSSMQFYAQLTFLDLSFNDMLTIPERSFAYHAKLQELHLDHN 129

  Fly   131 LVSSLHKHAFKGLTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLE 195
            .:..:....|.||:.:.:|:|..|.|..:.....|.:..|.||:|..|.|..::.:...|::.|.
  Fly   130 KIGQVSNKTFLGLSTISVLNLRGNLIAELEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLR 194

  Fly   196 VLVFRNNRLLDVPASNLWH-LHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSA 259
            ||...:|.|..||....:. ||:|..|.:..|....:...:|:.||.|..|.::|..:..:...|
  Fly   195 VLYLDDNTLTTVPGELTFQALHSLAELYLGTNSFMTIPGGAFQDLKGLTRLDLRGAGLHNISGDA 259

  Fly   260 FEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLDF 324
            .:||:||:.||||||.|..:||....:|..|..||:|.|.|..:.:.||..|..||.|.|:....
  Fly   260 LKGLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVISSGAFSGLRELRHLELTGAQR 324

  Fly   325 LQRIDSRAFVDNTHLQTLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQFPVDQLQK 389
            |:|::|.||..||:|:.|:|::|.||:::......|.|::..|.:::|.|.:|.....|...||.
  Fly   325 LRRVESGAFSGNTNLEHLNLSSNKQLNELSSIALGGLPHLSTVVLKANQLSSLDEGLVPWADLQT 389

  Fly   390 LYLGDNPLQCNCSLLWLWR-LVTGNFEGVDPGMEHAAGGAVAALAKEADDEELADEATAVASTDD 453
            |.|.:||.:|:|.||||.. ||:.|..|     ::|.  .:.|......|..||..|..:.....
  Fly   390 LDLSENPFECDCRLLWLRHLLVSRNASG-----QYAP--VICAYPTALRDLPLAHLAEPLLGCAH 447

  Fly   454 GVAALAAYIAEQHIVNALHTTEPSAYELATSSSNRNSGILRMDRQQIGCDIWRDKVRTRRKLLTM 518
            |.|:..|.|                            |||                         
  Fly   448 GAASKQAII----------------------------GIL------------------------- 459

  Fly   519 SEGEITCPAHIVTVVCAVITC---LLVAMIGISVLYYLRFVKRRRKLLHERGPMRTSKSIINVHD 580
               .:.|.|.|.|:...:.||   :...:.|.|.|        .||   ||...:|...     :
  Fly   460 ---VVACAALITTLALVLYTCRHRIREMLKGHSAL--------GRK---EREYQKTFSD-----E 505

  Fly   581 RILQGHNPGGLGL-----------GMSMTL---------------------GGGNHVNGLGMTLN 613
            ..:....|||.|:           |.|..:                     ||.:..:|....|.
  Fly   506 EYMSRPPPGGGGVHPAAGGYPYIAGNSRMIPVTELXLEAPPPPQLRGRGGGGGASTASGAVQQLQ 570

  Fly   614 YP--------------------HHAQTLQAH--------HHYHQAMPLQSHGGNGNHEYQQTTLP 650
            .|                    ::.|..||.        ||..|.|.|.:  .||......|:||
  Fly   571 VPSAVDQASNSFAQLSHIHYMTNNGQQQQAQQQQSTSKMHHSQQDMRLLA--CNGGKPLNATSLP 633

  Fly   651 Q-----LDKLELERYLAAQTIANEYRA---------------------LKPWELPVKEADDEPEH 689
            :     :.:..|..|  :|.:||..|.                     .||.     :|..||.:
  Fly   634 RHRPPVVQESTLSHY--SQPLANGIRLTQDHFNHNQNQSHNQHYGGVYAKPC-----DAMSEPGY 691

  Fly   690 LYERFDHYEYPDTHTMSKLKQAASLNHSNSSAGPSPVPPSSGKP----HVVYVXRGRGTGERVSQ 750
            ::.. .||..|..|.:              ...|:|.||....|    ..:.: .|..||.|...
  Fly   692 IHNN-SHYSLPLDHDL--------------PPSPTPTPPPPALPLRNGVGMALIHGNTTGRRSFN 741

  Fly   751 INTDIEMVGLNHLHLHHHHH---------------NNNNNYR 777
            .|.::..:..|      :||               |||.:.|
  Fly   742 NNNNVSTLSNN------NHHGIGGGVGVAVGGTVGNNNGSLR 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FiliNP_001369108.1 LRR 71..>348 CDD:443914 92/277 (33%)
leucine-rich repeat 75..97 CDD:275378 5/21 (24%)
leucine-rich repeat 98..121 CDD:275380 9/22 (41%)
leucine-rich repeat 122..145 CDD:275380 7/22 (32%)
leucine-rich repeat 146..169 CDD:275380 5/22 (23%)
leucine-rich repeat 170..193 CDD:275380 7/22 (32%)
leucine-rich repeat 194..217 CDD:275380 8/23 (35%)
leucine-rich repeat 218..265 CDD:275380 12/46 (26%)
leucine-rich repeat 266..289 CDD:275380 11/22 (50%)
leucine-rich repeat 290..313 CDD:275380 9/22 (41%)
leucine-rich repeat 314..338 CDD:275380 10/23 (43%)
LRR_8 337..397 CDD:404697 19/59 (32%)
leucine-rich repeat 339..360 CDD:275380 6/20 (30%)
capsNP_001303391.1 leucine-rich repeat 75..96 CDD:275380 5/20 (25%)
LRR_8 96..155 CDD:404697 19/58 (33%)
leucine-rich repeat 97..120 CDD:275380 9/22 (41%)
leucine-rich repeat 121..144 CDD:275380 7/22 (32%)
LRR 135..>398 CDD:443914 87/262 (33%)
leucine-rich repeat 145..168 CDD:275380 5/22 (23%)
leucine-rich repeat 169..192 CDD:275380 7/22 (32%)
leucine-rich repeat 193..217 CDD:275380 8/23 (35%)
leucine-rich repeat 218..241 CDD:275380 5/22 (23%)
leucine-rich repeat 242..265 CDD:275380 6/22 (27%)
leucine-rich repeat 266..289 CDD:275380 11/22 (50%)
leucine-rich repeat 290..313 CDD:275380 9/22 (41%)
leucine-rich repeat 314..335 CDD:275380 9/20 (45%)
leucine-rich repeat 339..363 CDD:275380 7/23 (30%)
LRRCT 395..445 CDD:214507 18/56 (32%)

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