DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fili and Tril

DIOPT Version :10

Sequence 1:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_001029182.1 Gene:Tril / 362364 RGDID:1310827 Length:811 Species:Rattus norvegicus


Alignment Length:820 Identity:197/820 - (24%)
Similarity:288/820 - (35%) Gaps:227/820 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RPWL--CGAIPVLLLLLLTLVILPPETTAFCPSKCQCLGGEANSRALCVDAALEDVPIQLNPETK 76
            |.||  ||.:           ..||...:.||.:|.|   :.....||.:..|..||...:..:.
  Rat     8 RFWLVVCGCL-----------AFPPRAESVCPERCDC---QHPQHLLCTNRGLRAVPKTSSLPSP 58

  Fly    77 YINLT-------VNRIRTLEFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNL--- 131
            ...||       :..|...:|..  ..:|..|||..|.|.:|..|.||..|.|..|.|..||   
  Rat    59 QDVLTYSLGGNFITNITAFDFHR--LGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQA 121

  Fly   132 ---------------------VSSLHKHAFKGLTNLLLLDLSFNRIETVHPTALSDLASLVELDL 175
                                 :..|.:.:|:||.:|:.|.|..|.:..:.....:.|.:|:.|.|
  Rat   122 LAPGTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHL 186

  Fly   176 TNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWH------LHALKSLDMSLNLVEFVRND 234
            ..|.|..|..|.|..:..|..|....|.|    ..:|.|      |.:|.:|.:|.|.::.:...
  Rat   187 EANRIRFLGKNAFTQLGKLRFLNLSANEL----QPSLRHAATFVPLRSLSTLILSANSLQHLGPR 247

  Fly   235 SFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNR 299
            .|:.|..|..||:.||.::.|...||.||.:|:.|.|..|.|..:|...|..|.:|..|:|.||.
  Rat   248 VFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLHSLEALDLSGNE 312

  Fly   300 FSQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFVDNTHLQTLHLNNNPQLSDIPMR---LFQGN 361
            .|.|....|.:...||||.| |.:.|..:....|..:..|..|.|:.|....|..:|   .:.||
  Rat   313 LSALHPATFGHQGRLRELSL-RDNALSALSGDIFAASPALYRLDLDGNGWTCDCRLRGLKRWMGN 376

  Fly   362 ----PNILEVYMQSN---SLQTLYSAQFPVDQLQKLYLGDNPLQCNCSLL----------WLWRL 409
                ..:|.|::|..   :|:..|     :|     ||.|..|| |.|.:          ..|.:
  Rat   377 WHSQGRLLTVFVQCRHPPALRGKY-----LD-----YLDDQLLQ-NGSCVDPSPSPTAGSRQWPI 430

  Fly   410 VTGNFEGVDP--GMEH----------------AAGGAVAALAKEADDEELADEATAVASTDDG-- 454
            .|...||:.|  |:..                ..|.|.|..||     ||....:|:.....|  
  Rat   431 STAPGEGMTPPAGLAQELPLQPQPQPQQRGRLLPGVAWAGAAK-----ELVGNRSALRLNRRGPG 490

  Fly   455 ------VAALAAYIAEQHIVNALH--------------TTEPSAYELATSSSNRNSGILRMDRQQ 499
                  .||.|:..|.|.:  .||              .|||      |.:|...||      ..
  Rat   491 LQHQSPSAAAASGSAPQSL--DLHEKPERGRPTRANLPQTEP------TPTSEPASG------TP 541

  Fly   500 IGCDIWRDKVRTRRKLLTMSEGE-------------ITCPAHIVTVVCAVITCLLVAMIGISVLY 551
            ...|.|:...:.|  |.:..:|.             ::.|......:...:|...|:....||.:
  Rat   542 SARDSWQRAAKQR--LASEQQGRAVQYDSGVGLPPLVSDPCDFNKFILCNLTVEAVSANSASVRW 604

  Fly   552 YLRFVKRRR-------KLLHERG------------PMRTSKSIINVHDRILQGHNP------GGL 591
            .:|..:..|       :||.:|.            |.|:..:  .:|:  |:|..|      |.|
  Rat   605 AVREHRSPRPQGGARFRLLFDRFGQQPKFQRFVYLPERSDSA--TLHE--LRGDTPYLVCVEGVL 665

  Fly   592 GLGMSMTLGGGNHVNGLGMTLNYPHHAQTLQAHHHYHQAMPLQSHGGNGNHEYQQTTLPQL--DK 654
            | |....:...:|..||                      :.|...||.|..:||..||..|  :.
  Rat   666 G-GRVCPVAPRDHCAGL----------------------VTLPEAGGRGGVDYQLLTLVLLAINA 707

  Fly   655 LELERYLAA---QTIANEYRALKPWELPVKEADDEPEHLY 691
            |.:...|||   :.:..:.||.:....||     ...|:|
  Rat   708 LLVLLALAAWGSRWLRRKLRARRKGGAPV-----HVRHMY 742

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FiliNP_001369108.1 LRR 71..>348 CDD:443914 87/313 (28%)
leucine-rich repeat 75..97 CDD:275378 4/28 (14%)
leucine-rich repeat 98..121 CDD:275380 10/22 (45%)
leucine-rich repeat 122..145 CDD:275380 9/46 (20%)
leucine-rich repeat 146..169 CDD:275380 5/22 (23%)
leucine-rich repeat 170..193 CDD:275380 8/22 (36%)
leucine-rich repeat 194..217 CDD:275380 7/28 (25%)
leucine-rich repeat 218..265 CDD:275380 16/46 (35%)
leucine-rich repeat 266..289 CDD:275380 8/22 (36%)
leucine-rich repeat 290..313 CDD:275380 8/22 (36%)
leucine-rich repeat 314..338 CDD:275380 8/23 (35%)
LRR_8 337..397 CDD:404697 17/69 (25%)
leucine-rich repeat 339..360 CDD:275380 6/23 (26%)
TrilNP_001029182.1 LRRNT 27..56 CDD:214470 9/31 (29%)
leucine-rich repeat 37..57 CDD:275378 5/19 (26%)
LRR 1 61..81 4/19 (21%)
LRR_8 65..119 CDD:404697 17/55 (31%)
LRR 2 84..105 9/20 (45%)
leucine-rich repeat 85..108 CDD:275380 10/22 (45%)
LRR 104..>359 CDD:443914 74/259 (29%)
LRR 3 108..129 5/20 (25%)
leucine-rich repeat 109..132 CDD:275380 5/22 (23%)
LRR 4 132..153 2/20 (10%)
leucine-rich repeat 133..156 CDD:275380 4/22 (18%)
LRR 5 156..177 4/20 (20%)
leucine-rich repeat 157..180 CDD:275380 5/22 (23%)
LRR 6 180..201 8/20 (40%)
leucine-rich repeat 181..204 CDD:275380 8/22 (36%)
LRR 7 204..223 6/22 (27%)
leucine-rich repeat 205..230 CDD:275380 7/28 (25%)
LRR 8 230..251 5/20 (25%)
leucine-rich repeat 231..254 CDD:275380 6/22 (27%)
LRR 9 254..275 8/20 (40%)
leucine-rich repeat 255..278 CDD:275380 10/22 (45%)
LRR 10 278..298 6/19 (32%)
leucine-rich repeat 279..302 CDD:275380 8/22 (36%)
LRR 11 302..323 8/20 (40%)
leucine-rich repeat 303..323 CDD:275380 8/19 (42%)
LRR 12 326..347 8/21 (38%)
leucine-rich repeat 327..340 CDD:275378 7/13 (54%)
PCC 332..>441 CDD:188093 29/120 (24%)
leucine-rich repeat 351..363 CDD:275378 4/11 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 414..460 6/45 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 486..562 19/91 (21%)
FN3 589..667 CDD:473895 18/82 (22%)

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