Sequence 1: | NP_001369108.1 | Gene: | Fili / 5740472 | FlyBaseID: | FBgn0085397 | Length: | 789 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101494.1 | Gene: | Lrfn5 / 314164 | RGDID: | 1309357 | Length: | 719 | Species: | Rattus norvegicus |
Alignment Length: | 535 | Identity: | 117/535 - (21%) |
---|---|---|---|
Similarity: | 172/535 - (32%) | Gaps: | 209/535 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 42 CPSKCQCLGGEANSRALCVDAALEDVPIQLNPETKYINLTVNRIRTLEFSLPFYMKLEILDLSQN 106
Fly 107 IIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLLLDLSFNRIETVHPTALSDLASLV 171
Fly 172 ELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSF 236
Fly 237 EGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFS 301
Fly 302 QLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFVDNTHLQTLHLNNNPQLSDIPMRLFQGNPNILE 366
Fly 367 VYMQSNSLQTLYSAQFPVDQLQKLYLGDNPLQCNCSLLWLWR--------------LVTGNFEGV 417
Fly 418 DPGME---------------------------HAAGGAVAALAKEADDEELADEATAVASTDDGV 455
Fly 456 ---------------------AALAAYIAEQHIV---------NALHTTEPSAYELATSS---SN 487
Fly 488 RNS--GILRMDRQQI 500 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Fili | NP_001369108.1 | leucine-rich repeat | 75..97 | CDD:275378 | 3/21 (14%) |
leucine-rich repeat | 98..121 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 120..180 | CDD:404697 | 17/59 (29%) | ||
leucine-rich repeat | 122..145 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 146..169 | CDD:275380 | 5/22 (23%) | ||
LRR | <161..>354 | CDD:227223 | 35/192 (18%) | ||
leucine-rich repeat | 170..193 | CDD:275380 | 0/22 (0%) | ||
leucine-rich repeat | 194..217 | CDD:275380 | 0/22 (0%) | ||
leucine-rich repeat | 218..265 | CDD:275380 | 10/46 (22%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 314..338 | CDD:275380 | 5/23 (22%) | ||
LRR_8 | 337..397 | CDD:404697 | 12/59 (20%) | ||
leucine-rich repeat | 339..360 | CDD:275380 | 6/20 (30%) | ||
Lrfn5 | NP_001101494.1 | LRR 1 | 52..73 | 8/31 (26%) | |
leucine-rich repeat | 53..76 | CDD:275380 | 7/33 (21%) | ||
PPP1R42 | 56..211 | CDD:411060 | 56/241 (23%) | ||
LRR 2 | 76..97 | 10/20 (50%) | |||
leucine-rich repeat | 77..100 | CDD:275380 | 11/22 (50%) | ||
LRR 3 | 100..121 | 9/92 (10%) | |||
leucine-rich repeat | 101..124 | CDD:275380 | 10/94 (11%) | ||
LRR 4 | 124..145 | 5/20 (25%) | |||
leucine-rich repeat | 125..148 | CDD:275380 | 5/22 (23%) | ||
LRR 5 | 148..169 | 9/20 (45%) | |||
leucine-rich repeat | 149..172 | CDD:275380 | 10/22 (45%) | ||
LRR 6 | 172..193 | 6/23 (26%) | |||
leucine-rich repeat | 173..196 | CDD:275380 | 8/25 (32%) | ||
LRR 7 | 196..217 | 9/42 (21%) | |||
leucine-rich repeat | 197..215 | CDD:275380 | 8/37 (22%) | ||
TPKR_C2 | 240..>272 | CDD:417692 | 13/31 (42%) | ||
IgI_SALM5_like | 287..374 | CDD:409421 | 10/86 (12%) | ||
Ig strand B | 304..308 | CDD:409421 | 0/3 (0%) | ||
Ig strand C | 317..321 | CDD:409421 | 1/3 (33%) | ||
Ig strand E | 340..344 | CDD:409421 | 1/3 (33%) | ||
Ig strand F | 354..359 | CDD:409421 | 0/4 (0%) | ||
Ig strand G | 367..370 | CDD:409421 | 0/2 (0%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 383..416 | 9/32 (28%) | |||
FN3 | 421..494 | CDD:419708 | 1/1 (100%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 614..719 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |