Sequence 1: | NP_001369108.1 | Gene: | Fili / 5740472 | FlyBaseID: | FBgn0085397 | Length: | 789 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_062037.1 | Gene: | Chad / 29195 | RGDID: | 2336 | Length: | 358 | Species: | Rattus norvegicus |
Alignment Length: | 387 | Identity: | 105/387 - (27%) |
---|---|---|---|
Similarity: | 152/387 - (39%) | Gaps: | 79/387 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 VLLLLLLTLVILPPETTAFCPSKCQCLGGEANSRALCVDAALEDVPIQLNPETKYINLTVNRIRT 87
Fly 88 LEFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLLLDLS 152
Fly 153 FNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWHLHA 217
Fly 218 LKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLTMVPTQ 282
Fly 283 QLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFVD-NTHLQTLHLNN 346
Fly 347 NPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQFPVDQLQKLYLGDNPLQCNCSLLWLWR 408 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Fili | NP_001369108.1 | leucine-rich repeat | 75..97 | CDD:275378 | 2/21 (10%) |
leucine-rich repeat | 98..121 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 120..180 | CDD:404697 | 20/59 (34%) | ||
leucine-rich repeat | 122..145 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 146..169 | CDD:275380 | 9/22 (41%) | ||
LRR | <161..>354 | CDD:227223 | 47/193 (24%) | ||
leucine-rich repeat | 170..193 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 194..217 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 218..265 | CDD:275380 | 5/46 (11%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 314..338 | CDD:275380 | 8/24 (33%) | ||
LRR_8 | 337..397 | CDD:404697 | 20/59 (34%) | ||
leucine-rich repeat | 339..360 | CDD:275380 | 7/20 (35%) | ||
Chad | NP_062037.1 | LRRNT | 22..48 | CDD:279764 | 8/28 (29%) |
LRR 1 | 51..72 | 7/43 (16%) | |||
leucine-rich repeat | 52..75 | CDD:275380 | 7/45 (16%) | ||
LRR_8 | 74..134 | CDD:290566 | 20/59 (34%) | ||
LRR 2 | 75..96 | 5/20 (25%) | |||
leucine-rich repeat | 76..99 | CDD:275380 | 7/22 (32%) | ||
LRR_RI | <89..281 | CDD:238064 | 62/241 (26%) | ||
LRR 3 | 99..120 | 7/20 (35%) | |||
leucine-rich repeat | 100..123 | CDD:275380 | 9/22 (41%) | ||
LRR 4 | 123..144 | 5/20 (25%) | |||
leucine-rich repeat | 124..147 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 147..206 | CDD:290566 | 21/106 (20%) | ||
LRR 5 | 147..168 | 8/68 (12%) | |||
leucine-rich repeat | 148..171 | CDD:275380 | 9/70 (13%) | ||
LRR 6 | 171..192 | 8/20 (40%) | |||
leucine-rich repeat | 172..195 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 195..255 | CDD:290566 | 21/61 (34%) | ||
LRR 7 | 195..216 | 7/20 (35%) | |||
leucine-rich repeat | 196..219 | CDD:275380 | 7/22 (32%) | ||
LRR 8 | 219..240 | 8/21 (38%) | |||
leucine-rich repeat | 220..243 | CDD:275380 | 8/23 (35%) | ||
LRR_8 | 243..300 | CDD:290566 | 19/58 (33%) | ||
LRR 9 | 244..265 | 7/21 (33%) | |||
leucine-rich repeat | 245..268 | CDD:275380 | 8/23 (35%) | ||
LRR 10 | 268..289 | 7/21 (33%) | |||
LRRCT | 299..346 | CDD:214507 | 7/14 (50%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 321..358 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |