Sequence 1: | NP_001369108.1 | Gene: | Fili / 5740472 | FlyBaseID: | FBgn0085397 | Length: | 789 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006499655.1 | Gene: | Rtn4rl2 / 269295 | MGIID: | 2669796 | Length: | 480 | Species: | Mus musculus |
Alignment Length: | 396 | Identity: | 101/396 - (25%) |
---|---|---|---|
Similarity: | 140/396 - (35%) | Gaps: | 142/396 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 PVLLLLLLTLVILPPETTAFCPSKCQCLGG------EANSRALCVDAALEDVPIQLNPETKYINL 80
Fly 81 TVNRIRTLEFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTN 145
Fly 146 LLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPAS 210
Fly 211 NLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNN 275
Fly 276 LTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRE--LHLSRLDFLQRIDSRAFVDNTH 338
Fly 339 LQTLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQFPVDQLQKLYLGDNPLQCNCSL 403
Fly 404 --LWLW 407 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Fili | NP_001369108.1 | leucine-rich repeat | 75..97 | CDD:275378 | 1/21 (5%) |
leucine-rich repeat | 98..121 | CDD:275380 | 0/22 (0%) | ||
LRR_8 | 120..180 | CDD:404697 | 23/59 (39%) | ||
leucine-rich repeat | 122..145 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 146..169 | CDD:275380 | 9/22 (41%) | ||
LRR | <161..>354 | CDD:227223 | 53/194 (27%) | ||
leucine-rich repeat | 170..193 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 194..217 | CDD:275380 | 2/22 (9%) | ||
leucine-rich repeat | 218..265 | CDD:275380 | 12/46 (26%) | ||
leucine-rich repeat | 266..289 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 314..338 | CDD:275380 | 8/25 (32%) | ||
LRR_8 | 337..397 | CDD:404697 | 13/59 (22%) | ||
leucine-rich repeat | 339..360 | CDD:275380 | 7/20 (35%) | ||
Rtn4rl2 | XP_006499655.1 | leucine-rich repeat | 122..143 | CDD:275380 | 8/69 (12%) |
LRR_8 | 143..203 | CDD:338972 | 25/106 (24%) | ||
leucine-rich repeat | 144..167 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 168..192 | CDD:275380 | 13/70 (19%) | ||
leucine-rich repeat | 193..216 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 216..275 | CDD:338972 | 21/61 (34%) | ||
leucine-rich repeat | 217..240 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 241..264 | CDD:275380 | 9/22 (41%) | ||
LRR_8 | 264..322 | CDD:338972 | 20/84 (24%) | ||
leucine-rich repeat | 265..288 | CDD:275380 | 8/25 (32%) | ||
leucine-rich repeat | 289..312 | CDD:275380 | 9/39 (23%) | ||
LRRCT | 321..371 | CDD:214507 | 7/15 (47%) | ||
PHA03247 | 349..>429 | CDD:223021 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24373 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.100 |