DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fili and lron-2

DIOPT Version :9

Sequence 1:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_505402.1 Gene:lron-2 / 179309 WormBaseID:WBGene00022789 Length:575 Species:Caenorhabditis elegans


Alignment Length:673 Identity:142/673 - (21%)
Similarity:243/673 - (36%) Gaps:211/673 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LLLLTLVILPPETTAF--CPS---KCQCL-------------GGEANSRALCVDAALEDVPIQLN 72
            ::|.|||:     |.:  ||:   .|:|.             .|...:....:.|| .|:||.  
 Worm     6 IILATLVV-----TVYGQCPALSGACRCAPSVYEPVAIICQNAGSLQNAIQAIQAA-RDIPID-- 62

  Fly    73 PETKYINLTVNRIRTLEFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHK 137
                                    .|.|||.:   |.|:.:..|:..:.|| |.|:||.:.::..
 Worm    63 ------------------------SLTILDTA---IPTIPANAFQSFTILR-LVLNRNTLQNIDD 99

  Fly   138 HAFKG--LTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLED---NCFKGMNTLEVL 197
            .||.|  |.:|:.|||:.|.:..:..|.:..|.:|.:|.|..|.|..|..   |.|:..:.|..|
 Worm   100 QAFNGPLLDSLIELDLNDNNLGQIPQTGIPRLRNLRKLYLNRNRINQLSSTAFNAFESRDLLLKL 164

  Fly   198 VFRNNRLLDV---PASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLA-LSVQGNVMSELDLS 258
            ....|||.|.   .|:....|..|:.|.:..|.:..:.:.:....:..|. |::..|.::|:.:.
 Worm   165 ELAGNRLTDATLGDATVFRPLTLLQELSLETNSLTSIPSSALVNQRNTLTNLNLGLNSINEVPVG 229

  Fly   259 AFEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRF----------------------- 300
            |.:..: |..|.|..|.:|::|.|....:.||.:|.:.||:|                       
 Worm   230 ALDFPV-LSSLSLEFNGITVIPPQAFQGVPNLQFLYMTGNKFPSWAPEMFRYITQLKTLGIGETP 293

  Fly   301 -SQLPAVAFLNLFHLRELHLSR--LDFLQRIDSRAFVDNTHLQTLHLNNNPQLSDIPMRLFQGNP 362
             |.:|..||:::.:|..|.:|.  :|.::|   .||.....:|.:.||.| :||.:....|:|..
 Worm   294 ISVIPNNAFMHIPNLIRLEMSEAAVDTIER---GAFQRTPQIQAIVLNKN-RLSQVRADFFEGLN 354

  Fly   363 NILEVYMQSNS------------------------LQTLYSAQF-------PVDQLQKLYLGDNP 396
            ::..:.:|.|.                        |||:.|..|       |.|: :.:|...||
 Worm   355 DLYSIDLQGNRIDNVQPLGFANLPAISHLDISYNLLQTMPSNVFQNSFLPQPNDR-RVIYACGNP 418

  Fly   397 LQCNCSLLWLWRLVTGNFEGVDPGMEHAAGGAVAALAKEADDEELADEATAVASTDDGVAALAAY 461
            ..||..|.|...|:..|.:                                              
 Worm   419 WYCNSELEWFRTLLRDNLD---------------------------------------------- 437

  Fly   462 IAEQHIVNALHTTEPSAYELATSSSNRNSGILRMDRQQIGCDIWRDKVRTRRKLLTMSEGE---- 522
                     :...:|....:.|||.|             ||.:....:|:........|.:    
 Worm   438 ---------IDVEKPGCTAVCTSSPN-------------GCPVEGTPLRSVDFCQNNEEAQPLVG 480

  Fly   523 --ITCPAHIVTVVCAVITCLLVAMIGISVLYYLRFVKRRRK-----LLHERGPMRTSKSI----I 576
              ::....|:..|  ::|.||:::..::::.|....:|:::     ...|.....|:.||    |
 Worm   481 RALSMVGWIILAV--IMTILLISICLLAMVRYGMSHQRKKQKDAEVAAEEYHHQTTATSIYNAPI 543

  Fly   577 NVHDRILQGHNPGGLGLGMSMTL 599
            :|.||......|..|.|..:.||
 Worm   544 SVVDRPYSTVPPVNLDLPAAYTL 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FiliNP_001369108.1 leucine-rich repeat 75..97 CDD:275378 0/21 (0%)
leucine-rich repeat 98..121 CDD:275380 7/22 (32%)
LRR_8 120..180 CDD:404697 21/61 (34%)
leucine-rich repeat 122..145 CDD:275380 10/24 (42%)
leucine-rich repeat 146..169 CDD:275380 7/22 (32%)
LRR <161..>354 CDD:227223 56/225 (25%)
leucine-rich repeat 170..193 CDD:275380 8/25 (32%)
leucine-rich repeat 194..217 CDD:275380 8/25 (32%)
leucine-rich repeat 218..265 CDD:275380 8/47 (17%)
leucine-rich repeat 266..289 CDD:275380 7/22 (32%)
leucine-rich repeat 290..313 CDD:275380 9/46 (20%)
leucine-rich repeat 314..338 CDD:275380 7/25 (28%)
LRR_8 337..397 CDD:404697 19/90 (21%)
leucine-rich repeat 339..360 CDD:275380 7/20 (35%)
lron-2NP_505402.1 leucine-rich repeat 64..84 CDD:275380 7/22 (32%)
leucine-rich repeat 85..109 CDD:275380 10/24 (42%)
LRR_8 86..144 CDD:290566 20/58 (34%)
LRR_RI 109..294 CDD:238064 44/185 (24%)
leucine-rich repeat 110..133 CDD:275380 7/22 (32%)
LRR_8 132..198 CDD:290566 19/65 (29%)
leucine-rich repeat 134..157 CDD:275380 8/22 (36%)
leucine-rich repeat 161..187 CDD:275380 8/25 (32%)
leucine-rich repeat 188..211 CDD:275380 3/22 (14%)
LRR_8 212..270 CDD:290566 17/58 (29%)
leucine-rich repeat 213..235 CDD:275380 5/21 (24%)
leucine-rich repeat 236..259 CDD:275380 7/22 (32%)
leucine-rich repeat 260..283 CDD:275380 5/22 (23%)
LRR_8 282..342 CDD:290566 15/63 (24%)
leucine-rich repeat 284..307 CDD:275380 4/22 (18%)
leucine-rich repeat 308..355 CDD:275380 15/50 (30%)
LRR_8 330..390 CDD:290566 10/60 (17%)
leucine-rich repeat 356..377 CDD:275380 2/20 (10%)
leucine-rich repeat 380..400 CDD:275380 5/19 (26%)
Ca_hom_mod <481..>504 CDD:291464 5/24 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D187891at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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