DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fili and LRRN2

DIOPT Version :9

Sequence 1:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_006329.2 Gene:LRRN2 / 10446 HGNCID:16914 Length:713 Species:Homo sapiens


Alignment Length:759 Identity:174/759 - (22%)
Similarity:281/759 - (37%) Gaps:203/759 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 WLCG---AIPVLLLLLLTLVILPPETTAFCPSKCQC----------LGGEANSRALCVDAALEDV 67
            |:.|   |:||          :|....  ||.:|.|          ...||.: ..|.|..|..|
Human    12 WVAGATAAVPV----------VPWHVP--CPPQCACQIRPWYTPRSSYREATT-VDCNDLFLTAV 63

  Fly    68 PIQLNPETKYINLTVNRI-RTLEFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNL 131
            |..|...|:.:.|..|.| |..:..|.:...|..||||||........:|....:|.:|:|..|.
Human    64 PPALPAGTQTLLLQSNSIVRVDQSELGYLANLTELDLSQNSFSDARDCDFHALPQLLSLHLEENQ 128

  Fly   132 VSSLHKHAFKGLTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEV 196
            ::.|..|:|.||.:|..|.|:.|::..:.|.|.|.|::|:.|.|.:|.:.:::...|:.:..||:
Human   129 LTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSNLLRAIDSRWFEMLPNLEI 193

  Fly   197 LVFRNNRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFE 261
            |:...|::..:             |||           :|..|..|.:|.:.|..:.|:...|.|
Human   194 LMIGGNKVDAI-------------LDM-----------NFRPLANLRSLVLAGMNLREISDYALE 234

  Fly   262 GLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLDFLQ 326
            ||.||:.|...||.|..||.:.|.::..|.:|:|..|...::....|.|:.||:||.|:.::.|.
Human   235 GLQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELV 299

  Fly   327 RIDSRAFVDNTHLQTLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQF-PVDQLQKL 390
            .||..|.|:...|..|.:.|||:||.|..|.|...|.:..:.:.:|:|..|:.... .:..||::
Human   300 SIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEV 364

  Fly   391 YLGDNPLQCNCSLLWLWRLVTGNFEGVDPGMEHAAGGAV------AALAKEADD----------- 438
            .|..||::|:|.:.|                .:|.|..|      :.|..|..|           
Human   365 GLHGNPIRCDCVIRW----------------ANATGTRVRFIEPQSTLCAEPPDLQRLPVREVPF 413

  Fly   439 EELADEATAVASTDDGVAALAAYIAEQHIVN--ALHTTEPSAYELATSSSNRNSGILRMDRQQIG 501
            .|:.|....:.|......:|.....|..:::  ||...||..|.:..:.       ||:.....|
Human   414 REMTDHCLPLISPRSFPPSLQVASGESMVLHCRALAEPEPEIYWVTPAG-------LRLTPAHAG 471

  Fly   502 CDIWRDKVRTRRKLLTMSEGEITCPAHIVTVVCAVITCLLVAMIGISVLYYLRFVKRRRKLLHER 566
                       |:.....||.:.. ..:......:.||:...::|..                  
Human   472 -----------RRYRVYPEGTLEL-RRVTAEEAGLYTCVAQNLVGAD------------------ 506

  Fly   567 GPMRTSKSIINVHDRIL--QGHNPG-GLGLGMSMTLGGGNHVNGLGMTLNYPHH--------AQT 620
                 :|::..|..|.|  .|.:.| ||.|.:..|               :|:|        ..|
Human   507 -----TKTVSVVVGRALLQPGRDEGQGLELRVQET---------------HPYHILLSWVTPPNT 551

  Fly   621 LQAHHHYHQAMPLQSHGG-------NGNHEYQQTTLPQLDKLELERYLAAQTIANEYRALKPWEL 678
            :..:..:..|..|:..|.       .|.|.|..|.|     |:...|.|...:|           
Human   552 VSTNLTWSSASSLRGQGATALARLPRGTHSYNITRL-----LQATEYWACLQVA----------- 600

  Fly   679 PVKEADDEPEHLYERFDHYEYPDTHTM-----SKLKQAASLNHS 717
                                :.|.||.     ::.|:|.|.:.:
Human   601 --------------------FADAHTQLACVWARTKEATSCHRA 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FiliNP_001369108.1 leucine-rich repeat 75..97 CDD:275378 6/22 (27%)
leucine-rich repeat 98..121 CDD:275380 8/22 (36%)
LRR_8 120..180 CDD:404697 21/59 (36%)
leucine-rich repeat 122..145 CDD:275380 9/22 (41%)
leucine-rich repeat 146..169 CDD:275380 8/22 (36%)
LRR <161..>354 CDD:227223 58/192 (30%)
leucine-rich repeat 170..193 CDD:275380 5/22 (23%)
leucine-rich repeat 194..217 CDD:275380 4/22 (18%)
leucine-rich repeat 218..265 CDD:275380 13/46 (28%)
leucine-rich repeat 266..289 CDD:275380 8/22 (36%)
leucine-rich repeat 290..313 CDD:275380 6/22 (27%)
leucine-rich repeat 314..338 CDD:275380 9/23 (39%)
LRR_8 337..397 CDD:404697 18/60 (30%)
leucine-rich repeat 339..360 CDD:275380 10/20 (50%)
LRRN2NP_006329.2 leucine-rich repeat 51..69 CDD:275380 6/18 (33%)
LRR_RI 62..288 CDD:238064 72/249 (29%)
LRR 1 70..91 6/20 (30%)
leucine-rich repeat 71..94 CDD:275380 6/22 (27%)
LRR 2 94..115 8/20 (40%)
leucine-rich repeat 95..118 CDD:275380 8/22 (36%)
LRR_8 117..177 CDD:290566 21/59 (36%)
LRR 3 118..139 7/20 (35%)
leucine-rich repeat 119..142 CDD:275380 9/22 (41%)
LRR 4 142..163 6/20 (30%)
leucine-rich repeat 143..166 CDD:275380 8/22 (36%)
LRR_8 165..222 CDD:290566 16/80 (20%)
LRR 5 166..187 5/20 (25%)
leucine-rich repeat 167..190 CDD:275380 5/22 (23%)
LRR 6 190..211 8/44 (18%)
leucine-rich repeat 191..214 CDD:275380 9/46 (20%)
LRR_RI 209..>372 CDD:238064 54/162 (33%)
LRR_8 214..273 CDD:290566 21/58 (36%)
LRR 7 214..235 5/20 (25%)
leucine-rich repeat 215..238 CDD:275380 8/22 (36%)
LRR 8 238..259 9/20 (45%)
leucine-rich repeat 239..262 CDD:275380 8/22 (36%)
LRR 9 262..283 5/20 (25%)
leucine-rich repeat 263..286 CDD:275380 6/22 (27%)
LRR 10 286..305 8/18 (44%)
leucine-rich repeat 287..311 CDD:275380 9/23 (39%)
LRR_8 310..371 CDD:290566 18/60 (30%)
LRR 11 311..333 10/21 (48%)
leucine-rich repeat 312..334 CDD:275380 10/21 (48%)
LRR 12 336..357 3/20 (15%)
leucine-rich repeat 337..360 CDD:275378 3/22 (14%)
leucine-rich repeat 361..373 CDD:275378 5/11 (45%)
TPKR_C2 369..412 CDD:301599 11/58 (19%)
I-set 430..514 CDD:254352 17/125 (14%)
Ig 438..514 CDD:299845 16/117 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8524
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24373
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.