DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fili and Chadl

DIOPT Version :10

Sequence 1:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_001419062.1 Gene:Chadl / 100910434 RGDID:6504353 Length:737 Species:Rattus norvegicus


Alignment Length:724 Identity:172/724 - (23%)
Similarity:254/724 - (35%) Gaps:212/724 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LLLLTLVILPPETTAF--CPSKCQCLGGEANSR--ALCVDAALEDVPIQLNPETKYINLTVNRIR 86
            ||||.:.:.|....|.  ||..|.|    .|||  ..|....|.:||..: ||     ||     
  Rat     9 LLLLMMFLSPAWNVAAQRCPQTCVC----DNSRRHVTCQHQNLTEVPDTI-PE-----LT----- 58

  Fly    87 TLEFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLLLDL 151
                        :.|||..|:::.:....|:....|..|:|....|..:.:.||:||..||.|:|
  Rat    59 ------------QRLDLQGNMLKVIPPAAFQDLPYLTHLDLQHCQVEQVAEGAFRGLGRLLFLNL 111

  Fly   152 SFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWHLH 216
            :.||:.::...||..|.||..|:|..|.:..|....|..:.:|..|...:|.|:.:||.      
  Rat   112 ASNRLSSLPQEALDGLGSLRRLELERNMLEELRPGTFGALGSLATLNLAHNALVYLPAM------ 170

  Fly   217 ALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLTMVPT 281
                              :|:||.....|.:..|.:|.|...|..||..|:.|.|..|.|..:|.
  Rat   171 ------------------AFQGLMRTRWLQLSHNALSVLAPEALAGLPVLRRLSLHHNELQALPG 217

  Fly   282 QQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFVDNTHLQTLHLNN 346
            ..||:..:|..|.||.|..:.......|.|..||||.|.. ..||.:..|||.....|.||.|  
  Rat   218 AALSQARSLARLELGHNPLTYTGEEDGLALPGLRELALDH-GSLQALGPRAFAHCPRLHTLDL-- 279

  Fly   347 NPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQFPVDQLQKLYLGDNPLQCNCS----LLWLW 407
                                   :.|.|.||...|.| .||::|.|..|||.|.|.    |.||.
  Rat   280 -----------------------RGNQLTTLPPLQVP-GQLRRLRLQGNPLWCACHARPLLEWLV 320

  Fly   408 RLVTGNFEGVDPGMEHAAGGAVAAL----------AKEADDEE-----------LADEA------ 445
            |....: :|...|.....|..:..|          |.|.:||:           |.:||      
  Rat   321 RARVRS-DGACRGPRRLRGETLDTLRPSDLRCPGDAAEDEDEDRPAGPRSPPRSLHEEARWATPC 384

  Fly   446 ---------TAVASTDD-GVAAL-----------------------AAYIAEQHIVNALHTTEPS 477
                     |..::.|. |:.|:                       ||:...:|:| :||.....
  Rat   385 PPACVCVGETRHSACDGRGLQAVPRGFPNDTQLLDLRRNHFPSVPRAAFPGLRHLV-SLHLQHCG 448

  Fly   478 AYELATSSSNRNSGILRMDRQQIGCDIWRDKVRTRRKLLTMSEGEITCPAHIVTVVCAVITCLLV 542
            ..||...:.....|::                     .|.:|..:::             .....
  Rat   449 IAELEPGALAGLDGLV---------------------YLYLSNNQLS-------------GLSAA 479

  Fly   543 AMIGISVLYYLRFVKRRRKLLHERGPMRTSKSIINVH------DRILQGHNPGGLGL-GMSMTLG 600
            |:.|...|.|| :::..|.|......:|....:.::|      ||:..|...|...| |:.::  
  Rat   480 ALEGAPNLGYL-YLEHNRFLRIPGAALRALPRLFSLHLQDNAVDRLAPGDLAGARALRGLYLS-- 541

  Fly   601 GGNHVNGLGM-TLNYPHHAQTLQAHHHYHQAMPLQSHGGNGNHEYQQTTLPQLDKLELERYLAAQ 664
             |||:..:.. .|......:.|....:..:.:|..:..|          ||.|.:|:|.|     
  Rat   542 -GNHITQVSPGALGPARELEKLHLDRNQLRQVPTGALEG----------LPALKELQLSR----- 590

  Fly   665 TIANEYRAL 673
               |.:|||
  Rat   591 ---NPFRAL 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FiliNP_001369108.1 LRR 71..>348 CDD:443914 78/276 (28%)
leucine-rich repeat 75..97 CDD:275378 2/21 (10%)
leucine-rich repeat 98..121 CDD:275380 5/22 (23%)
leucine-rich repeat 122..145 CDD:275380 8/22 (36%)
leucine-rich repeat 146..169 CDD:275380 9/22 (41%)
leucine-rich repeat 170..193 CDD:275380 6/22 (27%)
leucine-rich repeat 194..217 CDD:275380 6/22 (27%)
leucine-rich repeat 218..265 CDD:275380 10/46 (22%)
leucine-rich repeat 266..289 CDD:275380 8/22 (36%)
leucine-rich repeat 290..313 CDD:275380 7/22 (32%)
leucine-rich repeat 314..338 CDD:275380 10/23 (43%)
LRR_8 337..397 CDD:404697 15/59 (25%)
leucine-rich repeat 339..360 CDD:275380 4/20 (20%)
ChadlNP_001419062.1 LRRNT 27..59 CDD:214470 15/58 (26%)
leucine-rich repeat 38..56 CDD:275380 4/18 (22%)
leucine-rich repeat 58..81 CDD:275380 6/39 (15%)
LRR 61..>306 CDD:443914 85/295 (29%)
leucine-rich repeat 82..105 CDD:275380 8/22 (36%)
leucine-rich repeat 106..129 CDD:275380 9/22 (41%)
leucine-rich repeat 130..153 CDD:275380 6/22 (27%)
leucine-rich repeat 154..177 CDD:275380 9/46 (20%)
leucine-rich repeat 178..201 CDD:275380 7/22 (32%)
leucine-rich repeat 202..225 CDD:275380 8/22 (36%)
leucine-rich repeat 226..249 CDD:275380 7/22 (32%)
leucine-rich repeat 250..273 CDD:275380 10/23 (43%)
leucine-rich repeat 296..335 CDD:275380 14/39 (36%)
LRRNT 383..417 CDD:214470 4/33 (12%)
leucine-rich repeat 415..438 CDD:275380 2/22 (9%)
LRR <418..>638 CDD:443914 43/236 (18%)
leucine-rich repeat 439..462 CDD:275380 5/23 (22%)
leucine-rich repeat 463..486 CDD:275380 4/56 (7%)
leucine-rich repeat 487..510 CDD:275380 6/23 (26%)
leucine-rich repeat 511..534 CDD:275380 5/22 (23%)
leucine-rich repeat 535..558 CDD:275380 6/25 (24%)
leucine-rich repeat 559..582 CDD:275380 4/32 (13%)
leucine-rich repeat 583..607 CDD:275380 8/22 (36%)
leucine-rich repeat 608..631 CDD:275380
leucine-rich repeat 633..655 CDD:275380
leucine-rich repeat 656..667 CDD:275378
LRRCT 663..711 CDD:214507
Blue background indicates that the domain is not in the aligned region.

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