DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fili and chadl

DIOPT Version :10

Sequence 1:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster
Sequence 2:XP_002934783.2 Gene:chadl / 100491048 XenbaseID:XB-GENE-6050564 Length:721 Species:Xenopus tropicalis


Alignment Length:843 Identity:178/843 - (21%)
Similarity:299/843 - (35%) Gaps:239/843 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LLLLLLTLVIL---PPETTAFCPSKCQCLGGEANSRAL--CVDAALEDVPIQLNPETKYINLTVN 83
            ::..:|||:|:   .|.....||..|.|    .|.|..  |.:..|.:||..:...|:.::|..|
 Frog     1 MMWFVLTLIIMSAVKPLLCDRCPRVCIC----DNIRTFVACTNKNLTEVPTSIPQYTQKLDLRGN 61

  Fly    84 RIRTLE----FSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLT 144
            .::.:.    .|:|:   |..|.|.:..||.:..........|..|||..|.:|.:::.:|.||:
 Frog    62 DLKVIPNGAFLSVPY---LTHLSLQKCNIERIEEGALRGLGRLVYLNLGSNKISFIYQESFDGLS 123

  Fly   145 NLLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPA 209
            :|..|.|..||:|.:.|.|...|..|..|.|.:|.:|.|.|..|:|                   
 Frog   124 SLQQLVLEKNRLEEIKPGAFGQLGFLNFLHLGDNFLVYLPDMLFQG------------------- 169

  Fly   210 SNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDN 274
                 |..:|.:.:|.|::..|.|:                        ||..|.:||.|.|..|
 Frog   170 -----LQQVKWIRLSNNMINVVSNE------------------------AFAALPNLKRLSLDHN 205

  Fly   275 NLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFVDNTHL 339
            .|..:||..||::|.||.|.||.|..:.:...| :.:..|::|.|                    
 Frog   206 ELQYLPTDALSRMSGLTRLELGWNPMTFISEEA-VQMASLKQLFL-------------------- 249

  Fly   340 QTLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQFPVDQLQKLYLGDNPLQCNCSL- 403
                  ||..:.|:..:.|:.:|.:..:.:.:|.::|: .....::.|.:|.|..|.::|:|.| 
 Frog   250 ------NNMAIQDLSFKAFERSPQLSLIDLSNNQIRTI-QVLAGLEHLNRLNLTGNAIRCDCELR 307

  Fly   404 ---LWLWRLVTGNFEGV-------DPGMEHAAGGAVAALA---------KEAD----------DE 439
               .|      .:|..|       .||  |..|..:.:|.         .|.|          :|
 Frog   308 SFKQW------ADFSKVKVDLFCSGPG--HFRGDHLDSLRAIDLKCGNFPEEDYNLPPITPKPEE 364

  Fly   440 ELADEATAVASTDDGVAALAAYIAEQ----------------HIVNALHTTEPSAYELATSSSNR 488
            |.:...:.....||..........:|                ::.||:|.        ...|..:
 Frog   365 ESSCPRSCDCKPDDKHVLCENKFLQQIPKRFPVDTTLLDLRKNVFNAIHK--------GAFSEMK 421

  Fly   489 NSGILRMDRQQIGCDIWRDKVRTRRKL--LTMSEGEITCPAHIVTVVCAVITCLLVAMIGISVLY 551
            |...|.:...||. :|........:.|  |.:|..      |:.::...|...  ..|||...|.
 Frog   422 NVASLHLQSCQIN-EIQPGAFAGMKNLVYLYLSHN------HLSSIDPEVFRD--APMIGYLYLD 477

  Fly   552 YLRFVKRRRKLLHERGPMRTSKSIINVH----------DRILQGHNPGGLGLGMSMTLGGGNHVN 606
            :.||.:.      .:|..:...::.::|          |..:.|.:.      :......||::|
 Frog   478 HNRFTRL------SKGTFKFLPNLFSLHMQYNSISSLSDNFMSGADK------LHWVYMTGNNIN 530

  Fly   607 GLGMTLNYPHHAQTLQAHHHYHQAMPLQSHGGNGNHEYQQTTLPQLDKLELERYLAAQTIANEYR 671
            .:..:. :.::....:.|...:..|.:.:....|        ||.|::|.|.:.| .::|.|.. 
 Frog   531 YIASSA-FKNNKDLEKLHLDENLLMEVPTQAIKG--------LPLLNELRLSKNL-IRSIGNGA- 584

  Fly   672 ALKPWELPVKEADDEPEHLYERFDHYEYPDTHTMSKLKQA-ASLNHSNSSAGPSPVPPSSGKPHV 735
                 .|||..:   .:|||......|...:...|.|.|. .||:..|:.....|    :.||. 
 Frog   585 -----FLPVARS---LQHLYLNDLGLEQISSGGFSGLGQGIKSLHLDNNKLQNIP----NMKPF- 636

  Fly   736 VYVXRGRGTGERVSQINTDIEMVGL--NHLH-----LHHHHHNNNNNYR---GCVQSAKASGQ 788
                             |.:|::.|  |..|     |..|...|:.|.:   .|...:.|.||
 Frog   637 -----------------TGLEVINLANNPFHCDCRLLPLHKWINSLNLKVGATCAAPSSAKGQ 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FiliNP_001369108.1 LRR 71..>348 CDD:443914 68/280 (24%)
leucine-rich repeat 75..97 CDD:275378 5/25 (20%)
leucine-rich repeat 98..121 CDD:275380 5/22 (23%)
leucine-rich repeat 122..145 CDD:275380 9/22 (41%)
leucine-rich repeat 146..169 CDD:275380 9/22 (41%)
leucine-rich repeat 170..193 CDD:275380 9/22 (41%)
leucine-rich repeat 194..217 CDD:275380 1/22 (5%)
leucine-rich repeat 218..265 CDD:275380 8/46 (17%)
leucine-rich repeat 266..289 CDD:275380 10/22 (45%)
leucine-rich repeat 290..313 CDD:275380 7/22 (32%)
leucine-rich repeat 314..338 CDD:275380 3/23 (13%)
LRR_8 337..397 CDD:404697 11/59 (19%)
leucine-rich repeat 339..360 CDD:275380 4/20 (20%)
chadlXP_002934783.2 LRR 38..>300 CDD:443914 81/340 (24%)
leucine-rich repeat 53..76 CDD:275380 4/22 (18%)
leucine-rich repeat 77..100 CDD:275380 5/22 (23%)
leucine-rich repeat 101..124 CDD:275380 9/22 (41%)
leucine-rich repeat 125..148 CDD:275380 9/22 (41%)
leucine-rich repeat 149..172 CDD:275380 10/46 (22%)
leucine-rich repeat 173..196 CDD:275380 8/46 (17%)
leucine-rich repeat 197..220 CDD:275380 10/22 (45%)
leucine-rich repeat 221..243 CDD:275380 7/22 (32%)
leucine-rich repeat 244..267 CDD:275380 7/48 (15%)
leucine-rich repeat 268..287 CDD:275380 2/19 (11%)
PCC 272..>346 CDD:188093 17/82 (21%)
leucine-rich repeat 290..337 CDD:275380 14/54 (26%)
LRRNT 368..401 CDD:214470 3/32 (9%)
LRR 399..>649 CDD:443914 58/319 (18%)
leucine-rich repeat 399..422 CDD:275380 4/30 (13%)
leucine-rich repeat 423..446 CDD:275380 4/23 (17%)
leucine-rich repeat 447..470 CDD:275380 5/30 (17%)
leucine-rich repeat 471..494 CDD:275380 6/28 (21%)
leucine-rich repeat 495..518 CDD:275380 3/22 (14%)
leucine-rich repeat 519..542 CDD:275380 3/23 (13%)
leucine-rich repeat 543..566 CDD:275380 4/30 (13%)
leucine-rich repeat 567..591 CDD:275380 9/30 (30%)
leucine-rich repeat 592..615 CDD:275380 6/22 (27%)
leucine-rich repeat 617..639 CDD:275380 7/43 (16%)
leucine-rich repeat 640..651 CDD:275378 3/10 (30%)
LRRCT 647..693 CDD:214507 10/36 (28%)

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