DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fili and tlr3

DIOPT Version :9

Sequence 1:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster
Sequence 2:XP_002934448.3 Gene:tlr3 / 100486223 XenbaseID:XB-GENE-491049 Length:897 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FiliNP_001369108.1 leucine-rich repeat 75..97 CDD:275378
leucine-rich repeat 98..121 CDD:275380
LRR_8 120..180 CDD:404697
leucine-rich repeat 122..145 CDD:275380
leucine-rich repeat 146..169 CDD:275380
LRR <161..>354 CDD:227223
leucine-rich repeat 170..193 CDD:275380
leucine-rich repeat 194..217 CDD:275380
leucine-rich repeat 218..265 CDD:275380
leucine-rich repeat 266..289 CDD:275380
leucine-rich repeat 290..313 CDD:275380
leucine-rich repeat 314..338 CDD:275380
LRR_8 337..397 CDD:404697
leucine-rich repeat 339..360 CDD:275380
tlr3XP_002934448.3 PLN00113 26..>507 CDD:215061
leucine-rich repeat 54..74 CDD:275380
leucine-rich repeat 75..98 CDD:275380
leucine-rich repeat 99..122 CDD:275380
leucine-rich repeat 123..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..196 CDD:275380
leucine-rich repeat 197..230 CDD:275380
leucine-rich repeat 231..273 CDD:275380
leucine-rich repeat 274..297 CDD:275380
leucine-rich repeat 298..319 CDD:275380
leucine-rich repeat 322..347 CDD:275380
leucine-rich repeat 348..371 CDD:275380
leucine-rich repeat 424..448 CDD:275380
PPP1R42 446..637 CDD:411060
leucine-rich repeat 449..472 CDD:275380
leucine-rich repeat 473..498 CDD:275380
leucine-rich repeat 499..522 CDD:275380
leucine-rich repeat 523..554 CDD:275380
leucine-rich repeat 555..578 CDD:275380
leucine-rich repeat 579..602 CDD:275380
leucine-rich repeat 603..623 CDD:275380
PCC 607..>689 CDD:188093
Tlr3_TMD 691..720 CDD:407816
TIR 746..890 CDD:214587
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24373
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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