DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fili and LOC100151059

DIOPT Version :9

Sequence 1:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster
Sequence 2:XP_017207970.1 Gene:LOC100151059 / 100151059 -ID:- Length:605 Species:Danio rerio


Alignment Length:521 Identity:152/521 - (29%)
Similarity:228/521 - (43%) Gaps:82/521 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 AIPVLLLLLLTLVILPPETTAFCPSKCQCLGGEANSRAL-CVDAALEDVPIQLNPETKYINLTVN 83
            |:..|.:|.|.|.:..|..:. ||.:|.|   .|..|:: |....|..||..:..||:.::|:.|
Zfish     6 AVSRLCVLGLLLALAAPSCSG-CPPRCDC---AAQLRSVSCQRRRLSAVPEGVPTETRLLDLSRN 66

  Fly    84 RIRTLEF-SLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLL 147
            |:|.:.. .|..|.:||.||||:|:|.||....|.....||||.|..|.:..:...||..||||.
Zfish    67 RLRWVAAGDLAPYPRLEELDLSENLISTLEPNAFANLQALRTLRLRANQLKLVPMGAFARLTNLT 131

  Fly   148 LLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNL 212
            .||||.|||..:......||.||..|::.:|::|.:....|.|:.:||.|......|..:....|
Zfish   132 TLDLSENRIVILLDFTFQDLRSLKNLEVGDNDLVYISHKAFSGLLSLEDLTMARCNLTSISGQTL 196

  Fly   213 WHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQG----NVMSELDLSAFEGLISLKHLDLSD 273
            .:|..|.:|.:....:..:...:|..|..|..|.:..    ..:|.|   :|:|| :|..|.:::
Zfish   197 SYLRGLVTLRLRHLSISTLEEQNFRKLTALRGLEIHDWPFLEFISPL---SFQGL-NLSWLFITN 257

  Fly   274 NNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFVDNTH 338
            .|:|.||:.....|:.||.|||..|..|.|.:.||.:|..|:|||:...:.| .::..|......
Zfish   258 TNITSVPSASFRNLAYLTALNLSYNPISTLESWAFRDLIRLKELHMVSTNLL-TVEPHALGGLRQ 321

  Fly   339 LQTLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQF-PVDQLQKLYLGDNPLQCNCS 402
            ::.|:|:|                         |.|.||..:.| .|:.|:.|.:..|||.|:|.
Zfish   322 IRVLNLSN-------------------------NDLVTLEESSFHSVNSLETLRVDGNPLSCDCR 361

  Fly   403 LLW-LWRLVTGNFEGVDPGMEHAAGGAVAALAKEADDEELADEATAVASTDDGVAALAAYIAEQ- 465
            ||| |.|..|.||:|..|         |.|...|.....|:      ..||   :||..|...| 
Zfish   362 LLWILQRRRTLNFDGKMP---------VCAGPPEVQGYLLS------MFTD---SALFDYFTCQK 408

  Fly   466 -HIVN------ALHTTEPSAYELATSSSNRNSGILRMDRQQIGCDIWRDKVRTRRKLLTMSEGEI 523
             .|.|      .:|..:|.::            :.|.:.:.....||...  .||::.:.|.|.:
Zfish   409 PKIRNRKMQQVMVHEGQPVSF------------LCRAEGEPTPAIIWISP--QRRRITSKSNGRV 459

  Fly   524 T 524
            |
Zfish   460 T 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FiliNP_001369108.1 leucine-rich repeat 75..97 CDD:275378 7/22 (32%)
leucine-rich repeat 98..121 CDD:275380 11/22 (50%)
LRR_8 120..180 CDD:404697 25/59 (42%)
leucine-rich repeat 122..145 CDD:275380 9/22 (41%)
leucine-rich repeat 146..169 CDD:275380 10/22 (45%)
LRR <161..>354 CDD:227223 53/196 (27%)
leucine-rich repeat 170..193 CDD:275380 6/22 (27%)
leucine-rich repeat 194..217 CDD:275380 6/22 (27%)
leucine-rich repeat 218..265 CDD:275380 11/50 (22%)
leucine-rich repeat 266..289 CDD:275380 7/22 (32%)
leucine-rich repeat 290..313 CDD:275380 11/22 (50%)
leucine-rich repeat 314..338 CDD:275380 6/23 (26%)
LRR_8 337..397 CDD:404697 12/60 (20%)
leucine-rich repeat 339..360 CDD:275380 3/20 (15%)
LOC100151059XP_017207970.1 LRRNT 26..60 CDD:214470 12/37 (32%)
leucine-rich repeat 37..56 CDD:275380 5/18 (28%)
leucine-rich repeat 58..81 CDD:275380 7/22 (32%)
LRR_RI 61..332 CDD:238064 90/300 (30%)
LRR_8 80..140 CDD:290566 28/59 (47%)
leucine-rich repeat 82..105 CDD:275380 11/22 (50%)
leucine-rich repeat 106..129 CDD:275380 9/22 (41%)
LRR_8 128..188 CDD:290566 22/59 (37%)
leucine-rich repeat 130..153 CDD:275380 10/22 (45%)
leucine-rich repeat 154..177 CDD:275380 6/22 (27%)
leucine-rich repeat 178..201 CDD:275380 6/22 (27%)
leucine-rich repeat 202..225 CDD:275380 4/22 (18%)
leucine-rich repeat 226..249 CDD:275380 7/26 (27%)
LRR_8 249..308 CDD:290566 22/58 (38%)
leucine-rich repeat 250..273 CDD:275380 7/22 (32%)
leucine-rich repeat 274..295 CDD:275380 10/20 (50%)
LRR_8 297..356 CDD:290566 18/84 (21%)
leucine-rich repeat 298..321 CDD:275380 6/23 (26%)
leucine-rich repeat 322..342 CDD:275380 8/44 (18%)
leucine-rich repeat 346..358 CDD:275378 5/11 (45%)
TPKR_C2 354..394 CDD:301599 19/54 (35%)
I-set 409..499 CDD:254352 12/66 (18%)
Ig 424..492 CDD:299845 9/51 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24373
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.