DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fili and si:ch211-180f4.1

DIOPT Version :9

Sequence 1:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_001373634.1 Gene:si:ch211-180f4.1 / 100144405 ZFINID:ZDB-GENE-080327-27 Length:744 Species:Danio rerio


Alignment Length:705 Identity:163/705 - (23%)
Similarity:268/705 - (38%) Gaps:154/705 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TATTRSRPWLCGAIPVLLLLLLTLVILPPETTAFCPSKCQC----------LGGEANSRALCVDA 62
            ||.:.|...:|     |:|.:....:..|    |||::|.|          :..:|.: ..|.:.
Zfish     4 TAISTSLLTVC-----LVLAVCRCSLAVP----FCPAQCVCETRPWYTPQSVYHQAKT-VDCNEL 58

  Fly    63 ALEDVPIQLNPETKYINLTVNRIRTLEFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNL 127
            .|..:|..::.:|:.:.|..|.|......|...:.|..||||||....:........::|.||.|
Zfish    59 HLSRIPWNISVDTQVLLLQSNNISRGTSQLQSLVNLTELDLSQNHFTQIHDVGLNNLTQLVTLYL 123

  Fly   128 SRNLVSSLHKHAFKGLTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMN 192
            ..|.:..|.....|.|.:|..|.::.|:|.::.|.|.|.|.:|:.|.|.:|.:|:::.:.|:.:.
Zfish   124 EENQIKELPDMCLKDLVSLEELYINHNQISSIGPNAFSGLGNLLRLHLNSNKLVAIDSHWFESLP 188

  Fly   193 TLEVLVFRNNRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDL 257
            .||:|:...|.:|.:...|                        |..|.:|.:|.:.|..:.|:..
Zfish   189 NLEILMIGENPILGLQDMN------------------------FHPLTKLHSLVLAGMGLREIPE 229

  Fly   258 SAFEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRL 322
            .||:||..|:.|...||.||.||.:.|..|.:|.:|:|..|...::....|.:..||.||.|:.:
Zfish   230 GAFQGLEYLESLSFFDNKLTAVPKKALRVLPSLKFLDLNKNPIVRIQEGDFQDFPHLEELSLNNM 294

  Fly   323 DFLQRIDSRAFVDNTHLQTLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNSLQTL---YSAQFPV 384
            :.|..::..:|.:...:..|.|.|||.|..|....|.....:..:.:.:|.|..|   ..:.|| 
Zfish   295 EELVAVERGSFSNLPQMAKLELYNNPHLFFIDRAAFLKMRGLRTLLIHNNDLTLLPHEIVSAFP- 358

  Fly   385 DQLQKLYLGDNPLQCNCSLLWLWRLVTGN---FEGVDPGM------EHAAGGAVAALAKEADDEE 440
             .|.::.|..|||:|:|  |..|..|.||   .:.::|.:      :|..|.|            
Zfish   359 -NLDEISLHSNPLRCDC--LNNWGPVLGNQSSLKVLEPQITLCASPQHLVGQA------------ 408

  Fly   441 LADEATAVASTDDGVAALAAYIAEQHI----VN------------ALHTTEPSAY---------- 479
            |.|   .|:::.:|.:.....:..||.    :|            |:....|..|          
Zfish   409 LQD---VVSASWNGASNTCLPLISQHAFPPQLNVTLGQLLTLDCWAVADPAPQFYWVTPTGDKVT 470

  Fly   480 -ELATSSSNRNSGILRMDRQQIGCDIWRDKVRTRRKLLTMSEGEITCPAHIVTVVCAVITCLLVA 543
             |..:.|||...|..:..|.|                   .:|.:..| ||......:.||:...
Zfish   471 SEAVSPSSNEGGGTPKKHRMQ-------------------DQGALEIP-HIEPEDTGLYTCVAWN 515

  Fly   544 MIGI---SVLYYLRFVKRRRKLLHERGPMRTSKSIINVHDRILQGHNPGGLGLGMSMTLGG---- 601
            ..|.   ||..|:.  ||.....|..|                 ||:      |:..|.|.    
Zfish   516 AEGADTRSVSVYVD--KRSWNGAHHFG-----------------GHH------GVVNTTGSLVIL 555

  Fly   602 GNHVNGLGMTLNYPHHAQTLQAHHHYHQAMPLQSHGGNGNHEYQQTTLPQLDKLE 656
            ...|:...:.|.:..|...:.::|...|...|.:.....|.:...|.:..:|..|
Zfish   556 AKTVHAQSVVLEWKMHPYAIPSNHEAGQPKWLSATVKIDNPQISYTAMVPVDVQE 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FiliNP_001369108.1 leucine-rich repeat 75..97 CDD:275378 5/21 (24%)
leucine-rich repeat 98..121 CDD:275380 7/22 (32%)
LRR_8 120..180 CDD:404697 20/59 (34%)
leucine-rich repeat 122..145 CDD:275380 8/22 (36%)
leucine-rich repeat 146..169 CDD:275380 8/22 (36%)
LRR <161..>354 CDD:227223 54/192 (28%)
leucine-rich repeat 170..193 CDD:275380 6/22 (27%)
leucine-rich repeat 194..217 CDD:275380 6/22 (27%)
leucine-rich repeat 218..265 CDD:275380 10/46 (22%)
leucine-rich repeat 266..289 CDD:275380 10/22 (45%)
leucine-rich repeat 290..313 CDD:275380 5/22 (23%)
leucine-rich repeat 314..338 CDD:275380 6/23 (26%)
LRR_8 337..397 CDD:404697 16/62 (26%)
leucine-rich repeat 339..360 CDD:275380 8/20 (40%)
si:ch211-180f4.1NP_001373634.1 leucine-rich repeat 51..70 CDD:275380 3/19 (16%)
PPP1R42 55..266 CDD:411060 64/234 (27%)
leucine-rich repeat 71..93 CDD:275380 5/21 (24%)
leucine-rich repeat 94..117 CDD:275380 7/22 (32%)
leucine-rich repeat 118..141 CDD:275380 8/22 (36%)
leucine-rich repeat 142..165 CDD:275380 8/22 (36%)
leucine-rich repeat 166..189 CDD:275380 6/22 (27%)
leucine-rich repeat 190..213 CDD:275380 8/46 (17%)
leucine-rich repeat 214..237 CDD:275380 8/22 (36%)
leucine-rich repeat 238..261 CDD:275380 10/22 (45%)
LRR_8 260..320 CDD:404697 15/59 (25%)
leucine-rich repeat 262..285 CDD:275380 5/22 (23%)
leucine-rich repeat 286..310 CDD:275380 6/23 (26%)
leucine-rich repeat 311..330 CDD:275380 7/18 (39%)
leucine-rich repeat 336..359 CDD:275378 5/24 (21%)
PCC 341..>412 CDD:188093 23/89 (26%)
leucine-rich repeat 360..372 CDD:275378 5/11 (45%)
IG 434..528 CDD:214652 20/113 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6470
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24373
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

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