DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fili and elfn1b

DIOPT Version :10

Sequence 1:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster
Sequence 2:XP_001920383.1 Gene:elfn1b / 100144401 ZFINID:ZDB-GENE-080327-21 Length:814 Species:Danio rerio


Alignment Length:877 Identity:161/877 - (18%)
Similarity:283/877 - (32%) Gaps:319/877 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LCGAIPVLLLLLLTLVILPPETTAFCPSKCQCLGGEANS--RALCV--DAALEDVPIQLNPETKY 77
            ||.|:.::.|.|..:.::..:        |..:.||...  .|:|.  ....|::|:.:|.....
Zfish    25 LCWAVALVFLSLTRVPVVQGD--------CWLIEGEKGFVWLAICSQNQPPYENIPMHINSTIVD 81

  Fly    78 INLTVNRIRTLEFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKG 142
            :.|..|:||::.||          .||:     .|  |..|      |||::|.:|.:...||..
Zfish    82 LRLNENKIRSIHFS----------SLSR-----FG--NLTY------LNLTKNDISYIEDGAFSA 123

  Fly   143 LTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDV 207
            ..||.:|.:.||::.                        :|.:...:|:..|:.|..:.|.:..|
Zfish   124 QFNLQVLQIGFNKMR------------------------NLTEGMLRGLGRLQYLYLQANLIETV 164

  Fly   208 PASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMS-ELDLSAFEGLISLKHLDL 271
            .|:..|...|::::|:|:|.::.:...:|.||.:|....:..|..| ..:|..|     |:.   
Zfish   165 TANAFWECPAIENIDLSMNRIQQLDGATFRGLSKLTTCELYANPFSCSCELLGF-----LRW--- 221

  Fly   272 SDNNLTMVPTQQLSKLSNLTYLNLGG-NRFSQLPAV-AFLNLFHLRELHLSRLDFLQRIDSRAFV 334
                |...|.:...:::..|.....| :..||.|.: .:.|.||             .:.|....
Zfish   222 ----LVAFPNRTSERMACDTPAGFSGYSLLSQNPRMPRYRNAFH-------------ALSSVCTD 269

  Fly   335 DNTHLQTLHLNNNPQLSDIPMRLFQGNP----------------NILEVYMQSNS---------- 373
            ||.   |.:|:.:|. ..||.||...:|                :|...::.|::          
Zfish   270 DNV---TPYLHGSPD-GGIPTRLPDLSPCGLDDCSSGTFPEETISISPTFLDSDARPIMKLKEVT 330

  Fly   374 -LQTLYSAQFPVDQLQKLYLGDNPLQCNCSLLWLWRLVTGNFEGVDPGMEHAAGGAVAALAKEAD 437
             ...:.:.|.| :..:|:|:                ||..|         ::....:..|..:.:
Zfish   331 HTSAVITIQIP-NPFRKMYI----------------LVLYN---------NSFFTDIQNLKSQRE 369

  Fly   438 DEELADEATAVASTDDGVAALAAYIAEQHIVNALHTTEPSAYELATSSSNRNSGILRMDRQQIGC 502
            :.||                       |::.:  ||.    |....:|.                
Zfish   370 EIEL-----------------------QNLKS--HTN----YTYCVASI---------------- 389

  Fly   503 DIWRDKVRTRRKLLTMSEGEITCPAHIVT------VVCAVITCLLVAMIGISVLYYLRFVKRRRK 561
               |:.:|.....||:|.|..|....:|.      .:..::.||...:|.:.|:.:   ..|:||
Zfish   390 ---RNSLRFNHTCLTISTGPRTLQERVVNDSTATHYIMTILGCLFGMLIVLGVVVH---CLRKRK 448

  Fly   562 LLHERGPMRTSKSIINVHDRILQGHNPGGLGLGMSMTLGGGNHVNGLGMTLNYPHHAQTLQAHHH 626
            ...|    ..||.:..:...:::      :..|..:..|          |::.....|.|.|...
Zfish   449 KQDE----PKSKKLEKMKRNLIE------MKYGTELEQG----------TISQLSQKQILSAGET 493

  Fly   627 YHQAMP------------LQSHGG-----NGNH--------------------EYQQTTLPQLDK 654
            . |.||            :|...|     .||:                    |..|.::.::..
Zfish   494 V-QRMPYLPAASDTDQYKMQEISGTPKTTKGNYMEVRSEQPERSIRECSVPPSETSQGSVAEIST 557

  Fly   655 LELERYLAAQTIANEYRALKPWELPVKEADD------EP------EH----------LYERFDHY 697
            :..|.....|.|.|...|||......:.|..      ||      ||          :|:...|:
Zfish   558 IAKEVDKVNQIINNCIDALKSDSTSFQTAKSGAVSTAEPQLVLISEHPPGKSGFLSPVYKGGYHH 622

  Fly   698 EYPDTHTMSKLKQAASLNHSNSSAGP-------------------SPVPPSSGKPHVVYVXRG-- 741
            .....|:|...::.||.:.|.|...|                   ||...|.    ::.|...  
Zfish   623 PLQRHHSMDAPQKRASTSSSGSLRSPRSFRSEGAYRSESKYIEKASPQDESG----IITVTPAAA 683

  Fly   742 --RGTGERVSQINTDIEMVGLNHLHLH---HH 768
              |...||:.|.:        .|.|.:   ||
Zfish   684 ILRAEAERIRQYS--------EHRHSYPGPHH 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FiliNP_001369108.1 LRR 71..>348 CDD:443914 60/279 (22%)
leucine-rich repeat 75..97 CDD:275378 6/21 (29%)
leucine-rich repeat 98..121 CDD:275380 5/22 (23%)
leucine-rich repeat 122..145 CDD:275380 7/22 (32%)
leucine-rich repeat 146..169 CDD:275380 4/22 (18%)
leucine-rich repeat 170..193 CDD:275380 2/22 (9%)
leucine-rich repeat 194..217 CDD:275380 6/22 (27%)
leucine-rich repeat 218..265 CDD:275380 11/47 (23%)
leucine-rich repeat 266..289 CDD:275380 3/22 (14%)
leucine-rich repeat 290..313 CDD:275380 6/24 (25%)
leucine-rich repeat 314..338 CDD:275380 3/23 (13%)
LRR_8 337..397 CDD:404697 14/86 (16%)
leucine-rich repeat 339..360 CDD:275380 7/20 (35%)
elfn1bXP_001920383.1 LRR <68..>210 CDD:443914 43/188 (23%)
leucine-rich repeat 82..102 CDD:275378 9/36 (25%)
leucine-rich repeat 103..126 CDD:275378 8/28 (29%)
leucine-rich repeat 127..150 CDD:275378 6/46 (13%)
leucine-rich repeat 151..174 CDD:275378 6/22 (27%)
leucine-rich repeat 175..188 CDD:275378 3/12 (25%)
PCC 179..>247 CDD:188093 16/79 (20%)

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