DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fili and vasnb

DIOPT Version :10

Sequence 1:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_001104232.1 Gene:vasnb / 100004428 ZFINID:ZDB-GENE-110714-1 Length:668 Species:Danio rerio


Alignment Length:390 Identity:104/390 - (26%)
Similarity:148/390 - (37%) Gaps:84/390 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IPVLLLLLLTLVILPPETTAFCPSKCQCLGGEANSRALCVDAALEDVPIQLNPETKYINLTVNRI 85
            :||||.||...::..|.....||..|.|   :......|.......:|.::....|.:.:..|.|
Zfish     5 LPVLLPLLFYQLVPSPVLADTCPDNCTC---QVQDSIFCFSRKDTKMPSEVPTTVKNLYVFKNGI 66

  Fly    86 RTL-EFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLLL 149
            .:| :........||:||||||.:..|....||..|.|..|:||.|.:..:.|::|.||..|..|
Zfish    67 ESLSQEDFVHLGSLEMLDLSQNQLTELPDHVFEPLSSLNNLDLSANQIVHISKYSFAGLELLERL 131

  Fly   150 DLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWH 214
            .|..|.||::||.|...|..|:||.|                        :.|:|..:||..:.|
Zfish   132 YLYSNLIESIHPAAFDGLHELLELKL------------------------QGNKLKILPALKMPH 172

  Fly   215 LHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLTMV 279
               |..||:..|.:.....:..:..| |.:|.:.|..:|.|:........:|..||:|:|.||..
Zfish   173 ---LLLLDLRFNSIPSPGPNDLQTPK-LESLKLGGLGLSTLNEELLGSFKNLHELDISNNQLTAF 233

  Fly   280 PTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFVDNTHLQTLHL 344
            |. .|.:...|..|.|.||....|....|..|..|.||.:|.|.                     
Zfish   234 PV-VLREAKGLVSLVLAGNPMGPLNWEDFEKLTELHELDISNLS--------------------- 276

  Fly   345 NNNPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQFPVDQLQKLYLGDNPLQCNCSLLWL--W 407
                         .||.|..|              ||. :..|::|.:.:||..|.|:|.|.  |
Zfish   277 -------------LQGLPETL--------------AQL-LPHLKRLTVAENPFNCLCNLAWFPSW 313

  Fly   408  407
            Zfish   314  313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FiliNP_001369108.1 LRR 71..>348 CDD:443914 76/277 (27%)
leucine-rich repeat 75..97 CDD:275378 4/22 (18%)
leucine-rich repeat 98..121 CDD:275380 11/22 (50%)
leucine-rich repeat 122..145 CDD:275380 9/22 (41%)
leucine-rich repeat 146..169 CDD:275380 10/22 (45%)
leucine-rich repeat 170..193 CDD:275380 4/22 (18%)
leucine-rich repeat 194..217 CDD:275380 5/22 (23%)
leucine-rich repeat 218..265 CDD:275380 10/46 (22%)
leucine-rich repeat 266..289 CDD:275380 9/22 (41%)
leucine-rich repeat 290..313 CDD:275380 8/22 (36%)
leucine-rich repeat 314..338 CDD:275380 5/23 (22%)
LRR_8 337..397 CDD:404697 9/59 (15%)
leucine-rich repeat 339..360 CDD:275380 0/20 (0%)
vasnbNP_001104232.1 leucine-rich repeat 56..79 CDD:275380 4/22 (18%)
LRR <72..358 CDD:443914 87/320 (27%)
leucine-rich repeat 80..103 CDD:275380 11/22 (50%)
leucine-rich repeat 104..151 CDD:275380 19/46 (41%)
leucine-rich repeat 152..172 CDD:275380 8/43 (19%)
leucine-rich repeat 173..195 CDD:275380 4/21 (19%)
leucine-rich repeat 196..219 CDD:275380 5/22 (23%)
leucine-rich repeat 220..242 CDD:275380 9/22 (41%)
leucine-rich repeat 243..266 CDD:275380 8/22 (36%)
leucine-rich repeat 267..290 CDD:275380 11/71 (15%)
EGF_CA 417..449 CDD:238011
FN3 463..534 CDD:473895
Blue background indicates that the domain is not in the aligned region.

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