DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34213 and Nr2c2ap

DIOPT Version :10

Sequence 1:NP_001097439.2 Gene:CG34213 / 5740468 FlyBaseID:FBgn0085242 Length:139 Species:Drosophila melanogaster
Sequence 2:NP_001040569.1 Gene:Nr2c2ap / 361128 RGDID:1561190 Length:159 Species:Rattus norvegicus


Alignment Length:132 Identity:54/132 - (40%)
Similarity:70/132 - (53%) Gaps:27/132 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RVSSVLNRDVKQHGKQFMFDTREETSWNSDEGTPQFITISLEEPQKV--AGFSFQFQGGFSGQKS 74
            ||||||||:.:|.||:.:||..|||.||||:|..|:  :|||.||:|  .....|||||||.:.|
  Rat    13 RVSSVLNRNSRQFGKKHLFDQDEETCWNSDQGPCQW--VSLEFPQRVQITQLQVQFQGGFSSRHS 75

  Fly    75 ELIMYSADGAQVHQ-EPFYPEDINSPQLFQIAESVRENPCSKLKFVFESSTDLFGR-IIVYDLQL 137
            .| ..|.||..:.: ..|||||.|:.|:                    |.....|| ::.|.|.:
  Rat    76 RL-EGSRDGEALSKIVDFYPEDTNALQI--------------------SCLSCGGRDLVFYKLWV 119

  Fly   138 FG 139
            ||
  Rat   120 FG 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34213NP_001097439.2 None
Nr2c2apNP_001040569.1 APC10-like 12..>65 CDD:382862 28/53 (53%)

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