DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rgk3 and rem2

DIOPT Version :10

Sequence 1:NP_001286670.1 Gene:Rgk3 / 5740446 FlyBaseID:FBgn0085426 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001116518.1 Gene:rem2 / 798285 ZFINID:ZDB-GENE-081110-1 Length:306 Species:Danio rerio


Alignment Length:181 Identity:53/181 - (29%)
Similarity:84/181 - (46%) Gaps:32/181 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 QENHQPVEFYRVEMLGSAGVGKQALL--------------SQFRTSDCINAYDGPECDDAEQNVS 276
            |:.|.|:   |:.:||..||||.:|.              |:.:.:|  ..|......|.|.:..
Zfish    69 QKYHGPL---RIVLLGQNGVGKSSLALCLAGLSDRSLSIDSETQAAD--EGYPRRVTVDDEDSSI 128

  Fly   277 IILNGTESELKFLTGNPESKDELEQADAFLVVYSCIDKESFTRAKQILSRLQDMDLLRHRPTILV 341
            ::.:..:.||..|           |.:..::|:|..|:.||.|..|:  ||...:.|.|.|.|||
Zfish   129 LVYDNWKQELSTL-----------QCEVCILVFSLTDRRSFHRIAQL--RLLLRESLPHTPIILV 180

  Fly   342 ANKIDLARSRAVSAQDGKCVACTFGAKFIEVSVGINHNCDELLAGTLTQIR 392
            .||.||.|||.:|.::....|..||..::|:||.::|..::||...:...|
Zfish   181 GNKSDLVRSREISTEEAHSSAMMFGCLYLELSVSLDHRTNDLLEAAVRAAR 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk3NP_001286670.1 P-loop containing Nucleoside Triphosphate Hydrolases 235..>396 CDD:476819 50/172 (29%)
rem2NP_001116518.1 P-loop containing Nucleoside Triphosphate Hydrolases 75..305 CDD:476819 50/175 (29%)

Return to query results.
Submit another query.