DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgk3 and Rap2b

DIOPT Version :10

Sequence 1:NP_001286670.1 Gene:Rgk3 / 5740446 FlyBaseID:FBgn0085426 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_082988.1 Gene:Rap2b / 74012 MGIID:1921262 Length:183 Species:Mus musculus


Alignment Length:163 Identity:55/163 - (33%)
Similarity:84/163 - (51%) Gaps:8/163 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 YRVEMLGSAGVGKQALLSQFRTSDCINAYDGPECDDAEQNVSIILNGTESELKFL-TGNPES--- 295
            |:|.:|||.||||.||..||.|...|..|| |..:|..:. .|.::.:.|.|:.| |...|.   
Mouse     4 YKVVVLGSGGVGKSALTVQFVTGSFIEKYD-PTIEDFYRK-EIEVDSSPSVLEILDTAGTEQFAS 66

  Fly   296 -KD-ELEQADAFLVVYSCIDKESFTRAKQILSRLQDMDLLRHRPTILVANKIDLARSRAVSAQDG 358
             :| .::....|::|||.::::||...|.:..::..:......|.|||.||:||...|.||..:|
Mouse    67 MRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYERVPMILVGNKVDLEGEREVSYGEG 131

  Fly   359 KCVACTFGAKFIEVSVGINHNCDELLAGTLTQI 391
            |.:|..:...|:|.|.....:.|||.|..:.|:
Mouse   132 KALAEEWSCPFMETSAKNKASVDELFAEIVRQM 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk3NP_001286670.1 P-loop containing Nucleoside Triphosphate Hydrolases 235..>396 CDD:476819 55/163 (34%)
Rap2bNP_082988.1 Rap2 3..165 CDD:133376 55/163 (34%)
Effector region. /evidence=ECO:0000305 32..40 4/8 (50%)

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