DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rgk3 and Rala

DIOPT Version :10

Sequence 1:NP_001286670.1 Gene:Rgk3 / 5740446 FlyBaseID:FBgn0085426 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_062364.3 Gene:Rala / 56044 MGIID:1927243 Length:206 Species:Mus musculus


Alignment Length:205 Identity:58/205 - (28%)
Similarity:96/205 - (46%) Gaps:16/205 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 ANAQENHQPVEFYRVEMLGSAGVGKQALLSQFRTSDCINAYDGPECDDAEQNVSIILNGTESELK 287
            ||..:....:..::|.|:||.||||.||..||...:.:..|:..:.|...:.|  :|:|.|.::.
Mouse     3 ANKPKGQNSLALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKV--VLDGEEVQID 65

  Fly   288 FL-TGNPES----KDE-LEQADAFLVVYSCIDKESFTRA----KQILSRLQDMDLLRHRPTILVA 342
            .| |...|.    :|. ....:.||.|:|..:.|||...    :|||...:|.::    |.:||.
Mouse    66 ILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENV----PFLLVG 126

  Fly   343 NKIDLARSRAVSAQDGKCVACTFGAKFIEVSVGINHNCDELLAGTLTQIRLKKDQVQLQLNPKKS 407
            ||.||...|.||.::.|..|..:...::|.|.....|.|::....:.:||.:|.:...:.|.||.
Mouse   127 NKSDLEDKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREIRARKMEDSKEKNGKKK 191

  Fly   408 KDKDKNKFKE 417
            :.....:.:|
Mouse   192 RKSLAKRIRE 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk3NP_001286670.1 P-loop containing Nucleoside Triphosphate Hydrolases 235..>396 CDD:476819 51/170 (30%)
RalaNP_062364.3 RalA_RalB 15..177 CDD:206710 50/167 (30%)
Effector region 43..51 2/7 (29%)

Return to query results.
Submit another query.