DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgk3 and rasl11a

DIOPT Version :10

Sequence 1:NP_001286670.1 Gene:Rgk3 / 5740446 FlyBaseID:FBgn0085426 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001017840.2 Gene:rasl11a / 550538 ZFINID:ZDB-GENE-050417-384 Length:253 Species:Danio rerio


Alignment Length:177 Identity:49/177 - (27%)
Similarity:81/177 - (45%) Gaps:27/177 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 PVEFYRVEMLGSAGVGKQALLSQFRTSDCINAYDGPECDDAEQNVSIILNGTESELKFLTGNP-- 293
            |.:..::.:||::.|||.||:.:|.|...|..|:..  ..|..:..|.|:|.:..|: :...|  
Zfish    33 PNKNVKIVVLGASNVGKTALIVRFLTKRFIGDYEAN--TGALYSRKINLDGEQVSLQ-VQDTPCV 94

  Fly   294 ---ESKDEL---EQ-------ADAFLVVYSCIDKESFTRAKQILSRLQDMDLLRHRPTILVANKI 345
               :..|.|   ||       ||.:::|:|..|..|:...:.:...::.:....:.|.|:|.||.
Zfish    95 SLQDDADGLYCQEQINRSIYWADGYVLVFSITDLNSYRTIQPLYQHVRRIHPSGNIPVIIVGNKS 159

  Fly   346 DLARSRAVSAQDGKCVACTFGAKFIEVSVGINHN---------CDEL 383
            ||.|:|.||..:||.:|...|..:.|.|...||.         |.|:
Zfish   160 DLLRARQVSDPEGKALADELGGLYFEASARENHESVQAAFLHLCQEV 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk3NP_001286670.1 P-loop containing Nucleoside Triphosphate Hydrolases 235..>396 CDD:476819 48/173 (28%)
rasl11aNP_001017840.2 RERG_RasL11_like 38..208 CDD:206713 48/172 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..233
Blue background indicates that the domain is not in the aligned region.

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