DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgk3 and CG8641

DIOPT Version :9

Sequence 1:NP_001286670.1 Gene:Rgk3 / 5740446 FlyBaseID:FBgn0085426 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001261494.1 Gene:CG8641 / 38771 FlyBaseID:FBgn0035733 Length:434 Species:Drosophila melanogaster


Alignment Length:511 Identity:96/511 - (18%)
Similarity:155/511 - (30%) Gaps:203/511 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 IHGMPGASGSATPEGGTPGYRRRRPATRSQSARITSGARSVRQKTKAQQ----QQQQQQHTLQET 92
            ||  |.|:.:.||..        |..:.|.:..:.|.:....|:|.|.:    ...|..||...:
  Fly    28 IH--PSAATTTTPNS--------RNFSASNNNNVRSNSSKSNQQTAAHRGATTHPTQIPHTHHPS 82

  Fly    93 RSYCTSEPRLSETETPPQRRKLSQRRPQTHAHRKSNAFLD----------------VPTMNMHHL 141
            .::.|.|      .:|||...::              |||                |.|..:|..
  Fly    83 TTHSTDE------ASPPQAHVVT--------------FLDESTAGGSNGAVTSSRLVTTAELHQA 127

  Fly   142 RVNDDDEDVDRLRTFSASKGGIINRGDSFRRRRSRSNSLAPSSPMHTRNGVGGLGGVAGGGSSLG 206
            .:.:...::|           .|.:.|.|                           :.|.|:.|.
  Fly   128 HMLEHHSNLD-----------AIEQADDF---------------------------IYGPGAGLS 154

  Fly   207 LGCGYNGGSSSNGFGNANAQENHQPVEFYRVEMLGSAGVGKQALLSQFRTSDCINAYDGPECDDA 271
            | |..:..|:.|               .||:.||||:..||.:::::|..:....||. |..::.
  Fly   155 L-CDDSLPSAKN---------------CYRLVMLGSSRAGKSSIVARFLGNRFEEAYT-PTIEEF 202

  Fly   272 EQNVSIILN----------------GTESELKFLTGNPESKDELEQADAFLVVYSCIDKESFTRA 320
            .:.:..|.|                .....|.||||           |.|::|:|...:|||...
  Fly   203 HRKLYRIRNEVFQLDILDTSGYHPFPAMRRLSFLTG-----------DLFILVFSMDSRESFEEV 256

  Fly   321 KQILSRLQD-------------MDLLRHRPTILVANKIDLARSRA--------VSAQDGKCVACT 364
            .::...:.:             ...|...|.||..||.|......        ::.||..|.   
  Fly   257 VRLRENILETKWAALNPGSGFKKKSLPKIPMILAGNKCDRDFKTVQVDEVMGYIAGQDNCCT--- 318

  Fly   365 FGAKFIEVSVGINHNCDELLAGTLTQIRLKKDQVQLQLNP------------------------- 404
                |:|.|...|:..|:|.....|...|     .|::.|                         
  Fly   319 ----FVECSARQNYRIDDLFHSLFTVSNL-----PLEMTPNHHRRLVSVFGAPSPLPPHGSAVGG 374

  Fly   405 -KKSKDKDKNKFKE-------NTNIETVETDNCLTDLKA---DDGGPRDANSPAHW 449
             ||:....|.:|.:       |....::.||..|...|.   ::|  ....||:.|
  Fly   375 TKKNALSIKRRFSDACGVVTPNARRPSIRTDLNLMRSKTMALNEG--EGVRSPSRW 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk3NP_001286670.1 P-loop_NTPase 235..>396 CDD:422963 44/197 (22%)
CG8641NP_001261494.1 Rhes_like 167..434 CDD:133343 59/288 (20%)
RAS 167..338 CDD:214541 42/189 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453016
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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