DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgk3 and kappaB-Ras

DIOPT Version :9

Sequence 1:NP_001286670.1 Gene:Rgk3 / 5740446 FlyBaseID:FBgn0085426 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001137613.1 Gene:kappaB-Ras / 35667 FlyBaseID:FBgn0040513 Length:201 Species:Drosophila melanogaster


Alignment Length:146 Identity:35/146 - (23%)
Similarity:58/146 - (39%) Gaps:53/146 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 RVEMLGSAGVGKQALLSQFRTSDCINAYDGPECD------------------DAEQNVSII---- 278
            :|.:.|..||||.||:.|.     :..:..||.:                  .|.:.:.|.    
  Fly    11 KVLVCGMKGVGKTALIEQL-----VYGHVNPETELHPTIEDIYVASVDTGRGGARETLRIYDTAG 70

  Fly   279 LNGTESELKFLTGNPESKDELEQADAFLVVYSCIDKESFTRAKQILSRLQDM--DLLRHR----- 336
            |.|.:.:|        .:..|:..|||::||..:|..|       |..|.|:  |:.:|:     
  Fly    71 LQGEQQQL--------PRHYLQFPDAFVLVYDPMDPRS-------LDMLADIKADIEKHKEKKEI 120

  Fly   337 PTILVANKIDLARSRA 352
            |.:::||    .|:||
  Fly   121 PVVVLAN----VRARA 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk3NP_001286670.1 P-loop_NTPase 235..>396 CDD:422963 35/146 (24%)
kappaB-RasNP_001137613.1 Ras 11..173 CDD:278499 35/146 (24%)
Ras_like_GTPase 13..174 CDD:206648 34/144 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453018
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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