Protein Alignment Rgk3 and Gem

DIOPT Version :9

• Sequence 1: NP_001286670.1
• Gene: Rgk3 / 5740446
• FlyBaseID: FBgn0085426
• Length: 486
• Species: Drosophila melanogaster
• Sequence 2: NP_001100107.1
• Gene: Gem / 297902
• RGDID: 1307386
• Length: 295
• Species: Rattus norvegicus
• Alignment Length: 271
• Identity: 78/271 - (28%)
• Similarity: 116/271 - (42%)
• Gaps: 67/271 - (24%)

  Fly   234 FYRVEMLGSAGVGKQALLSQF------RTSDC----INAYDGPECDDAEQNVSIILNGTESELKF 288
            :|||.::|..||||..|.:.|      ..|||    .:.|:.....|.|....|:|:..|::
  Rat    74 YYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLVVDGESATIILLDMWENK--- 135

  Fly   289 LTGNPESKDE--LEQADAFLVVYSCIDKESFTRAKQILSRLQDMDLLRHRPTILVANKIDLARSR 351
              |..|...:  ::..||:|:|||..|:.||.:|.::..:|:........|.|||.||.||.|.|
  Rat   136 --GENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCR 198

  Fly   352 AVSAQDGKCVACTFGAKFIEVSVGINHNCDELLAGTLTQIRLKKDQVQLQLNPKKSKDKDKNKFK 416
            .||..:|:..|..|..||||.|..:.||..||..|.:.|:||::|          ||:|::.:..
  Rat   199 EVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRRD----------SKEKNERRLA 253

  Fly   417 ENTNIETVETDNCLTDLKADDGGPRDANSPAHWYKSRSVMLASMKARQMLTWILGKEDS------ 475
            .....|::               ||                   |||:....|:.|.:.
  Rat   254 YQKRRESI---------------PR-------------------KARRFWGKIVAKNNKNMAFKL 284

  Fly   476 KFKHCENLQVL 486
            |.|.|.:|.||
  Rat   285 KSKSCHDLSVL 295

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rgk3	NP_001286670.1	P-loop_NTPase	235..>396	CDD:422963	60/172 (35%)
Gem	NP_001100107.1	RGK	75..295	CDD:206715	76/268 (28%)
		small_GTPase	75..241	CDD:197466	59/170 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0395
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D301527at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		mtm8910
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.820