Protein Alignment Rgk3 and REM1

DIOPT Version :9

• Sequence 1: NP_001286670.1
• Gene: Rgk3 / 5740446
• FlyBaseID: FBgn0085426
• Length: 486
• Species: Drosophila melanogaster
• Sequence 2: XP_005260461.1
• Gene: REM1 / 28954
• HGNCID: 15922
• Length: 306
• Species: Homo sapiens
• Alignment Length: 287
• Identity: 80/287 - (27%)
• Similarity: 116/287 - (40%)
• Gaps: 66/287 - (22%)

  Fly   216 SSNGFGNANAQENHQPVEFYRVEMLGSAGVGKQALLSQFR----------------TSDCINAYD 264
            ||:..|:..|        .|||.:||..||||.:|.|.|.                .|...:.|:
Human    70 SSDSEGSWEA--------LYRVVLLGDPGVGKTSLASLFAGKQERDLHEQLGDPALPSVAEDVYE 126

  Fly   265 GPECDDAEQNVSIILNGTESELKFLTGNPESKDELEQADAFLVVYSCIDKESFTRAKQILSRLQD 329
            .....|.|....::::..|:|....:.:.||.  |:...|:::|||..|:.||..|.::..:|:.
Human   127 RTLTVDGEDTTLVVVDTWEAEKLDKSWSQESC--LQGGSAYVIVYSIADRGSFESASELRIQLRR 189

  Fly   330 MDLLRHRPTILVANKIDLARSRAVSAQDGKCVACTFGAKFIEVSVGINHNCDELLAGTLTQIRLK 394
            .....|.|.|||.||.||||.|.||.::|:..|..|..||||.|..:.||..||..|.:.|:||:
Human   190 THQADHVPIILVGNKADLARCREVSVEEGRACAVVFDCKFIETSATLQHNVAELFEGVVRQLRLR 254

  Fly   395 KDQVQLQLNPKKSKDKDKNKFKENTNIETVETDNCLTDLKADDGGPRDANSPAHWYKSRSVMLAS 459
            :         :.|..|:                            |.....||...:.....||.
Human   255 R---------RDSAAKE----------------------------PPAPRRPASLAQRARRFLAR 282

  Fly   460 MKARQMLTWILGKEDSKFKHCENLQVL 486
            :.||......|   .::.|.|.||.||
Human   283 LTARSARRRAL---KARSKSCHNLAVL 306

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rgk3	NP_001286670.1	P-loop_NTPase	235..>396	CDD:422963	60/176 (34%)
REM1	XP_005260461.1	RGK	81..306	CDD:206715	74/266 (28%)
		small_GTPase	81..245	CDD:197466	56/165 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0395
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D301527at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45775
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	4	3.920