DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgk3 and W04C9.5

DIOPT Version :9

Sequence 1:NP_001286670.1 Gene:Rgk3 / 5740446 FlyBaseID:FBgn0085426 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_490735.3 Gene:W04C9.5 / 189184 WormBaseID:WBGene00021027 Length:369 Species:Caenorhabditis elegans


Alignment Length:385 Identity:88/385 - (22%)
Similarity:147/385 - (38%) Gaps:85/385 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ASGSATPEGGTPGYRRRRPATRSQSAR-ITSGARSVRQKTKAQQQQQQQQH-TLQETRSYCTSEP 100
            :|..:.|...:|...||...|...|.| :.|..|:|..:..........:| ....|.|...:.|
 Worm    19 SSRLSPPSPASPAATRRSLPTSPISRRSLPSTPRTVSPRRLNNLLPDVDEHFASTSTTSSSENSP 83

  Fly   101 RLSETETPPQRRKLSQRRPQTHAHRKSNAFLDVPTMNMHHLRVNDDDEDVDR-----LRTFSASK 160
            |..:...||.|.:.|                    :.||...:    |||::     ||:|....
 Worm    84 RRVKKRYPPPRYQYS--------------------LQMHQNNI----EDVEKRPEGSLRSFGIKN 124

  Fly   161 GGIINRGDSFRRRRSRSNSLAPSSPMHTRNGVGGLGGVAGGGSSLGLGCGYNGGSSSNGFGNANA 225
            |.:.:.|        ...:.:...|:...|                             :.:..|
 Worm   125 GFVTDNG--------YKQTCSTGQPVVAHN-----------------------------YKDRRA 152

  Fly   226 ---------QENHQPVEFYRVEMLGSAGVGKQALLS---QFRTSDCINAY--DGPECDD-AEQNV 275
                     :.::.|::...:.:.||...||:.|||   ||.|. .:..|  :..|.|| :.:.:
 Worm   153 TCPEVWLFQETSNVPMQHVVLRVYGSRNSGKKTLLSAINQFATR-LVTQYNNESNEGDDTSSKTM 216

  Fly   276 SIILNGTESELK-FLTGNPESKDELEQADAFLVVYSCIDKESFTRAKQILSRLQDMDLLRHRPTI 339
            :.:||..:.||: .|....|:.........:.:||:..::|||..|..:||||.:..:.|....|
 Worm   217 NFLLNNEQIELEMLLEATLENSPFASSLTMYAIVYNVDNRESFVCATDLLSRLLNRKIARGANII 281

  Fly   340 LVANKIDLARSRAVSAQDGKCVACTFGAKFIEVSVGINHNCDELLAGTLTQIRLKKDQVQ 399
            |:.|||||.|:..||..:|.|:|......|:|||...:.|..||....|.|::..|.:::
 Worm   282 LIGNKIDLKRNTVVSKMEGACLAKVHKCNFVEVSAQYSMNISELWTIILKQLQAPKAELE 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk3NP_001286670.1 P-loop_NTPase 235..>396 CDD:422963 53/167 (32%)
W04C9.5NP_490735.3 P-loop_NTPase 171..333 CDD:304359 52/162 (32%)
Ras 177..333 CDD:278499 52/156 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45775
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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