DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgk3 and LOC1269613

DIOPT Version :10

Sequence 1:NP_001286670.1 Gene:Rgk3 / 5740446 FlyBaseID:FBgn0085426 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_308256.4 Gene:LOC1269613 / 1269613 VectorBaseID:AGAMI1_007514 Length:610 Species:Anopheles gambiae


Alignment Length:532 Identity:156/532 - (29%)
Similarity:227/532 - (42%) Gaps:135/532 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SPMHHRMQ------------------------KKTRSASI----CATGASIETVIHGMPGASGSA 42
            ||.|.|.|                        .:|.|.|:    |....|..|....:...||..
Mosquito   163 SPRHSRRQLNSEIINITSNPGYQVLRNSHSTLDRTCSDSVVSLTCRKSTSDLTQTSDLGMMSGMG 227

  Fly    43 TPEGGTPGYRRRRPATRSQSARITS--GARSVRQKTKAQQQQQQQQHTLQETRSYCTSEPRLSET 105
            :..||..|  |||.:.:...|.:.|  |:|                   ...:|..::....|..
Mosquito   228 SSGGGRQG--RRRSSHKGGLAFLASRKGSR-------------------DSIKSAASNTSVFSNE 271

  Fly   106 ETPPQRRKLSQRRPQTHAHRKSNAFLDVPTMNMHHLRVND---------DDEDVDRLRTFSASKG 161
            :..|...:.|.|..|    |:::.||::|..:....||..         ..:|:.|||.||.|||
Mosquito   272 DIGPLAFQASARGRQ----RRTSNFLELPVPDHARPRVCSLPERPYNPRQSDDLYRLRHFSISKG 332

  Fly   162 GIINRGDSFRRRRSRSNSLAPSSPMHTRNGVGGLGGVAGGG----SSLGLGCGYNGGSSSNGFGN 222
            .::|.|||...|||:||:...|:...........|...|||    .||         .||:|   
Mosquito   333 TVVNCGDSIISRRSKSNTSVNSTASRASERSPFEGSCCGGGYATVDSL---------PSSHG--- 385

  Fly   223 ANAQENHQPVEF-YRVEMLGSAGVGKQALLSQFRTSDCINAYDGPECDD-AEQNVSIILNGTESE 285
              ..:..:|:.. |||.|||.:||||.||:|||.||:.::.||....|: .|:.||::|:|.|||
Mosquito   386 --EDDESEPIPTRYRVVMLGDSGVGKTALVSQFMTSEYMHTYDASLDDEFGEKTVSVLLDGEESE 448

  Fly   286 LKFLTGNPESKDELE------QADAFLVVYSCIDKESFTRAKQILSRLQDMDLLRHRPTILVANK 344
            :.|: .:|..:..:|      :..|.:||||.:|:.||...::||:.|......:.:..|:.|||
Mosquito   449 MIFI-DHPNVEMSVENSLSTYEPHACVVVYSIVDRNSFRVTEEILNYLWSEHYTKEKAVIIAANK 512

  Fly   345 IDLARSRAVSAQDGKCVACTFGAKFIEVSVGINHNCDELLAGTLTQIRLKKDQVQLQLNPKKSKD 409
            .||||:|.::..:||.:|.:..|||||.|.||.||.||||.|.|.|||||               
Mosquito   513 SDLARARVITTAEGKQLATSREAKFIETSSGIQHNVDELLVGVLKQIRLK--------------- 562

  Fly   410 KDKNKFKENTNIETVETDNCLTDLKADDGGPRDANSPAHWYKSRSVMLASMKARQMLTWILGKED 474
            :.:.|....||:.                            .||:.|...: |:::|..|...:.
Mosquito   563 EQREKRASATNLR----------------------------NSRTQMSLHI-AKEILHKICLTDI 598

  Fly   475 SKFKHCENLQVL 486
            :|.|.||||.||
Mosquito   599 TKSKSCENLHVL 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk3NP_001286670.1 P-loop containing Nucleoside Triphosphate Hydrolases 235..>396 CDD:476819 75/167 (45%)
LOC1269613XP_308256.4 None

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