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Protein Alignment CG34242 and Smim20
DIOPT Version :10
| Sequence 1: | NP_001097595.1 |
Gene: | CG34242 / 5740417 |
FlyBaseID: | FBgn0085271 |
Length: | 58 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_063129573.1 |
Gene: | Smim20 / 501923 |
RGDID: | 1565192 |
Length: | 72 |
Species: | Rattus norvegicus |
| Alignment Length: | 59 |
Identity: | 18/59 - (30%) |
| Similarity: | 30/59 - (50%) |
Gaps: | 10/59 - (16%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MAVLRGWR----FVGFVSCIVGAVGLTLYPVIVDPMVNTEKYKTLQEYSK--IKRDELQ 53
||..|..| |.||:| .||...||:...|::..|:|:..|..:: |.::::|
Rat 1 MAAARNLRTALIFGGFIS----MVGAAFYPIYFRPLLRLEEYQKEQAVNRAGIVQEDVQ 55
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CG34242 | NP_001097595.1 |
DUF4538 |
4..56 |
CDD:405708 |
16/56 (29%) |
| Smim20 | XP_063129573.1 |
None |
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