DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snoo and SKI

DIOPT Version :9

Sequence 1:NP_001097115.1 Gene:Snoo / 5740414 FlyBaseID:FBgn0085450 Length:1223 Species:Drosophila melanogaster
Sequence 2:XP_005244832.1 Gene:SKI / 6497 HGNCID:10896 Length:730 Species:Homo sapiens


Alignment Length:1018 Identity:246/1018 - (24%)
Similarity:363/1018 - (35%) Gaps:363/1018 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PMISTVLKKYQTSATKSLQGPGHALTTAGVLDIVTNGRSESPGLNGKCQASPPVVALIKKEILSS 71
            |.:...|:::..|:..||.||. |.:.....:..   :.||....|......||.|        :
Human    15 PGLQKTLEQFHLSSMSSLGGPA-AFSARWAQEAY---KKESAKEAGAAAVPAPVPA--------A 67

  Fly    72 PEPQDLHHHECSTRGTPPQIYSPA--TPPRELSQPILSVADAGCGELYETKLEGKTIGCFSVGGE 134
            .||             ||.::.||  .||..|..|....:|... |..||.|||:||.||.||||
Human    68 TEP-------------PPVLHLPAIQPPPPVLPGPFFMPSDRST-ERCETVLEGETISCFVVGGE 118

  Fly   135 MRLCLPQFLNNVLNDFSLEQINRIFDELGIYCSQCTHDQLVEFKAAKILPSDVKASGLITRTDAE 199
            .||||||.||:||.||||:|||.:.|||.||||:||.|||...|...|||....:.||||:||||
Human   119 KRLCLPQILNSVLRDFSLQQINAVCDELHIYCSRCTADQLEILKVMGILPFSAPSCGLITKTDAE 183

  Fly   200 RLCAALLHRSDRNSYVP------IESLAKG----ALSFHVYHKCFGKCEGICTPDMYSYQKPTCI 254
            |||.|||:   ..:|.|      ..|||.|    ..|..|||:|||||:|:..|::||.....||
Human   184 RLCNALLY---GGAYPPPCKKELAASLALGLELSERSVRVYHECFGKCKGLLVPELYSSPSAACI 245

  Fly   255 KCLECDGWFSPQKFVGHVHRKFENHTCHWGFDSRNWHDYLHVALDVENREKYQII---LDQLKEV 316
            :||:|...:.|.|||.|.|:..||.||||||||.||..|:.::.|...:|:...:   ||.:|| 
Human   246 QCLDCRLMYPPHKFVVHSHKALENRTCHWGFDSANWRAYILLSQDYTGKEEQARLGRCLDDVKE- 309

  Fly   317 ELKEMHKAQRELEHKKRKAEMLMDDGMLGSGPVLGLAGHPHGLVGALAPPPPPPMKQPQMD---- 377
                  |.....::|:|...:..:                           ||...:|:.|    
Human   310 ------KFDYGNKYKRRVPRVSSE---------------------------PPASIRPKTDDTSS 341

  Fly   378 ---IPSGKKQ----LQQLKGATVAASALEYQYQVMYAHCVQKEREREREHLPHSHPLPRQHRAVL 435
               .||.|.:    |:.|.|::..:..           ||.                |||.    
Human   342 QSPAPSEKDKPSSWLRTLAGSSNKSLG-----------CVH----------------PRQR---- 375

  Fly   436 VATTPYPHLPQYPTPPTLNSSSAFRPWGPDTTKAFLHAYGATLSSLPYACQEPPELQNPERVVRS 500
                                .||||||.|        |..|:...|           :|......
Human   376 --------------------LSAFRPWSP--------AVSASEKEL-----------SPHLPALI 401

  Fly   501 TDKRYAERTYQ----PNVALAP--RKSILSKERDKDRERMEREVMERQRLREKETDHQVVHIKQE 559
            .|..|:.::::    |||||||  ::.::|                                   
Human   402 RDSFYSYKSFETAVAPNVALAPPAQQKVVS----------------------------------- 431

  Fly   560 RSQTPTPPTASPPDGVVLPLDVVEPPHPSSSGSNSPLPAHLPAAPATAPPNAGGAPPTPTNLR-- 622
                 :||.|:.......||.....|.      ...|....|.||.|..|.|  ||....:..  
Human   432 -----SPPCAAAVSRAPEPLATCTQPR------KRKLTVDTPGAPETLAPVA--APEEDKDSEAE 483

  Fly   623 -NMRSPEEFSAGGSNEITSSTSPHHQQSSHHQVVQPTAGAPPPSQHIIATVNQHAKLLPSSSSLP 686
             .:.|.||.:.  ::.::|.:||....||..:    ..|:|            .|:.||  |::|
Human   484 VEVESREECTF--TSSLSSLSSPSFTSSSSAK----DLGSP------------GARALP--SAVP 528

  Fly   687 NGNGSSSLAATNNEPSRIRINKNLMSQQPVVAVSGMTPHHHQHHPTHMHHFSHGYYKSQASSPTQ 751
            :                                                          |::|..
Human   529 D----------------------------------------------------------AAAPAD 535

  Fly   752 SSSAGLNLSTHSSNVVSSPHHATQPKTHHSSVGSGNHGLQNGKPHLGSEFELSTDTDDTDSLNGE 816
            :.|                                  ||:....||....|...||.:..     
Human   536 APS----------------------------------GLEAELEHLRQALEGGLDTKEAK----- 561

  Fly   817 PDSSAMLPPWEQAVESLRETRPKDRERVLLILQRLLQENDQYRYNNIQLSELLHKQDAHIADLTE 881
                      |:.:..:.:.|.|..|::...||.....:.:..:..:...|.|.:......:|.:
Human   562 ----------EKFLHEVVKMRVKQEEKLSAALQAKRSLHQELEFLRVAKKEKLREATEAKRNLRK 616

  Fly   882 QLQRYRRQFEEQVCKVDLRKMPFK---HQTRLENV----VEAGRGEAEEDEELEE---------- 929
            :::|.|.:.|:::.:.:..::..|   .|.|...|    .||||..|:...::|:          
Human   617 EIERLRAENEKKMKEANESRLRLKRELEQARQARVCDKGCEAGRLRAKYSAQIEDLQVKLQHAEA 681

  Fly   930 DEMEDRANNNNQQELSPLIKAPANGLRRSVTP---PNCCASEG 969
            |..:.||:...::|....::.....|:..:.|   |....|||
Human   682 DREQLRADLLREREAREHLEKVVKELQEQLWPRARPEAAGSEG 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SnooNP_001097115.1 Ski_Sno 114..207 CDD:280577 60/92 (65%)
c-SKI_SMAD_bind 226..317 CDD:198114 43/93 (46%)
SKIXP_005244832.1 DHD_Ski 91..192 CDD:410786 62/104 (60%)
c-SKI_SMAD_bind 217..312 CDD:198114 44/101 (44%)
fibronec_FbpA <383..>481 CDD:411474 30/164 (18%)
Smc <540..>711 CDD:224117 33/185 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 120 1.000 Domainoid score I5757
eggNOG 1 0.900 - - E1_28KYF
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002607
OrthoInspector 1 1.000 - - otm40493
orthoMCL 1 0.900 - - OOG6_107704
Panther 1 1.100 - - O PTHR10005
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.810

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