DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17707 and ndg-4

DIOPT Version :10

Sequence 1:NP_001162627.1 Gene:CG17707 / 5740408 FlyBaseID:FBgn0025835 Length:990 Species:Drosophila melanogaster
Sequence 2:NP_001022618.1 Gene:ndg-4 / 175582 WormBaseID:WBGene00003577 Length:687 Species:Caenorhabditis elegans


Alignment Length:734 Identity:150/734 - (20%)
Similarity:257/734 - (35%) Gaps:230/734 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 WAQKAYDSSGRYRGQLLFGNDKWLGQLSFCYELNRQSLTEERQHFDLQFYVADVALH--LPSLNR 358
            |..|.:||.|:....:..||..|||....|..|.... :.:.|:..::..|.|..:.  .|..: 
 Worm   112 WVLKWFDSLGKPAAGITDGNYYWLGDYELCAALASDG-SFDGQYCRIEMEVPDAGVESGCPQTD- 174

  Fly   359 SMLLSLGECLPKSCSDIDVKSILSLD-PYARMLTVLGAHNTSMQQPPLQILHVRTVPGIYSHWRQ 422
            .:.:.||.|.|.:||..|:.::.|:. ||                      :::......:.|  
 Worm   175 PLSIILGVCFPSACSVADLTTVSSIYLPY----------------------NLKVECESQNRW-- 215

  Fly   423 LKFQVFISFMLTLFLVILVASYYQLKIDERRLVVAPIAAISGKCDGTSTKNDVFYGKSFELFQMR 487
                   ||:..|.|:||:            :.:.|.|..:                    ||  
 Worm   216 -------SFVTVLLLIILM------------VWIVPQAVAT--------------------FQ-- 239

  Fly   488 PLGCTSSSTDDPEVDVNGNRQRCGDSSDMENGVQREFADPNTSTSVGEKSEMGDYQMETGSCAGG 552
                 :||.|                                                       
 Worm   240 -----TSSND------------------------------------------------------- 244

  Fly   553 TGTYEAKQSVALHQQILLCFALQTNAKAILNINK-TKEIHTACLHGLR--VFSVLWTMMVHTYLQ 614
                          .||.||::..|||...:..: :..:|.  :|||.  :|..:.:.||:.::.
 Worm   245 --------------SILSCFSIPDNAKRTFSTRRESPNLHV--VHGLEFLLFFTIVSGMVYNFML 293

  Fly   615 MFAIGEN---KFERIITERSFWYQVIGNATFSVDSFFFISGLLVTMLYLKQNRKYPTETCLFIKS 676
            .:.  ||   .||.:   .||...::.|.::.:|....:|....|.|..        ...|.::|
 Worm   294 PYI--ENVAFAFEGV---SSFPMHIVNNYSYQIDGLLALSAFYTTYLLF--------GNILTLRS 345

  Fly   677 CFSESLMMLLYRYLRLTPVYLFVVIFNDFAVRQGLDTSVFQPAKIEHNT---CRMYWWRNILYIN 738
            .|...||    |..|..|.|:..|:|. :.:..|:.:.   |..|..:|   |...||:|||:||
 Worm   346 AFDYILM----RLFRFWPAYIVCVLFM-YVIFPGVSSG---PMWIHTDTVNRCGSGWWKNILFIN 402

  Fly   739 NYFPQTEMCMMWSWYMANEMQFYVMAALLLALARKYFKAVAITLFVFLLSSWSISGIISLTYQYT 803
            |:|..|:.|:...:.::.|.|:|.:...::.|:.||  .:...||.:.:...||  |.|....|:
 Worm   403 NWFNVTDTCVDIGYVISMEAQYYAILIFVIFLSSKY--PLLTQLFAYTVFGSSI--IFSFVRAYS 463

  Fly   804 HKVSLP---------------FESFDFLYDKPWQRVGSYIMGMCTGYVLYKVKTPPLISRRLNLS 853
            .:  ||               :..||.|....:.|..:|.:|...|   ....|.....|...||
 Worm   464 QE--LPPAPMLTLEPVPLTKVYAVFDQLLLSLFARSSNYCLGFIFG---IGCATASDELRESGLS 523

  Fly   854 LWACSLFVLLIVVFGV-------------WEGHLGTTSSAFYVGVAHTAFGCGLVWIVLSCCWGL 905
            .....|..::.:.|.|             |..:. ...:|.|..:....:...|:..|..|..|.
 Worm   524 YCMHKLLAIICIAFAVVPFVGAFPYSAYAWVSNF-EIMNASYAALHRPMWSFALLSFVYLCHHGA 587

  Fly   906 VPT--VNAILSYRVMWPLSRLTYCAYLI-HPIIMFICSSHMSGTVHLSNPLILTLF------LGN 961
            ...  :||:|.:||..|||::|:.|.:: .|||::..||       |:.|...|.:      :..
 Worm   588 FSKEWLNALLEWRVFAPLSKVTWIALVVAEPIILYFFSS-------LNKPAYATHWSTMYTAIST 645

  Fly   962 AVVSFGCAFVISAFFEAPV 980
            |::::..|..:..|...|:
 Worm   646 ALLAYFVAMFLDIFVTRPI 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17707NP_001162627.1 NRF 294..399 CDD:214781 26/105 (25%)
OafA 595..985 CDD:441440 102/431 (24%)
ndg-4NP_001022618.1 NRF 110..215 CDD:214781 26/126 (21%)
Acyl_transf_3 334..649 CDD:473885 83/347 (24%)

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