DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34345 and AT4G35820

DIOPT Version :10

Sequence 1:NP_001097101.1 Gene:CG34345 / 5740402 FlyBaseID:FBgn0085374 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_195307.1 Gene:AT4G35820 / 829736 AraportID:AT4G35820 Length:272 Species:Arabidopsis thaliana


Alignment Length:188 Identity:46/188 - (24%)
Similarity:85/188 - (45%) Gaps:36/188 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 EEISRDPLIWLYHDVI--------YDSEIAQLTNVTREEMILGTTTNYTT------PDRVNRLFH 358
            |.|:::|..::||:.:        .:.|...|.::.:..|......|..|      ..|.:....
plant    89 EVITKEPRAFVYHNFLALFFKICKTNEECDHLISLAKPSMARSKVRNALTGLGEESSSRTSSGTF 153

  Fly   359 IKVTDDDGGKLDKTLVNRMADISGLDVGNTTTLARINYGLGGYFQEHSDYMDIKLYPELTEEGDR 423
            |:...|   |:.|.:..|:::.:.:...|..||..|||.:|..|:.|.|..            .|
plant   154 IRSGHD---KIVKEIEKRISEFTFIPQENGETLQVINYEVGQKFEPHFDGF------------QR 203

  Fly   424 LMTFLFYMTDVPVGGTTIFPGAQ-------LAIQPKKGSALFWYNLHNNGDPNLLTRH 474
            :.|.|.|::||..||.|:||.|:       ::::||||.||.::::..:|..:..::|
plant   204 IATVLMYLSDVDKGGETVFPEAKGIKSKKGVSVRPKKGDALLFWSMRPDGSRDPSSKH 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34345NP_001097101.1 P4Ha_N 40..172 CDD:462433
P4Hc 324..489 CDD:214780 41/164 (25%)
AT4G35820NP_195307.1 Retrotran_gag_2 <3..>64 CDD:464108
PLN00052 76..>262 CDD:177683 46/188 (24%)
Blue background indicates that the domain is not in the aligned region.

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