DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34345 and p4htmb

DIOPT Version :9

Sequence 1:NP_001097101.1 Gene:CG34345 / 5740402 FlyBaseID:FBgn0085374 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_001340234.2 Gene:p4htmb / 799930 ZFINID:ZDB-GENE-110131-7 Length:510 Species:Danio rerio


Alignment Length:466 Identity:98/466 - (21%)
Similarity:155/466 - (33%) Gaps:171/466 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 HANDMEEALMGMDRIEHFYDLKSSDMAQGLVAGQQLSSRMSASDCLALADYMYKRSEFRRAAEWY 204
            |.|:      |.:.|....|..|||.:...|.|        |||..|.||..:.|:.|....|..
Zfish    80 HYNN------GSNAISANRDFTSSDSSSHKVTG--------ASDAQATADSGFPRNMFLPRIEGI 130

  Fly   205 RIA-------LSVFTKPKNNIAFK---FYAPKRKELEKMFVISRL-------------QEG---- 242
            |:.       :|........::.|   |..|.....|:..|:.||             .||    
Zfish   131 RVGHVQKVSLVSGKVHEMKTLSLKPLLFEIPDFLSEEECAVVVRLAQLKGLMESQVMVPEGQEEL 195

  Fly   243 ------SVENLTDCLKELSQD----PNNSLVHLRPRKSPTMIEQGCQGKFP------PGPQLVC- 290
                  |.|.:.:.| :|:||    |:..|.|.|.|....:..:..:..:.      .|..|:. 
Zfish   196 DQQLNLSPEEIFNFL-DLNQDGQLQPHEILTHSRVRDGIWLTSENLKEIYDGLKADLDGNGLLSL 259

  Fly   291 ----RYNSTTTPFMRIAPLKEEEISRDPLI------WLY-----HDVIYDSEIAQLTNVTREEMI 340
                |..|..  |.|.  |.:..:.|..|:      |||     |.|:.|.. .::|.:||    
Zfish   260 EEFGRLRSDA--FQRF--LLQRGVERSQLVRNSRHTWLYQGQGAHQVLQDLR-KRVTLLTR---- 315

  Fly   341 LGTTTNYTTPDRVNRLFHIKVTDDDGGKLDKTLVNRMADISGLDVGNTTTLARINYGLGGYFQEH 405
                                            |.:.:.::|       ..|..:.|..||::..|
Zfish   316 --------------------------------LPSSLVELS-------EPLQVVRYEQGGHYHAH 341

  Fly   406 SDYMDIKLYPELT--------------EEGDRLMTFLFYMTDVPVGGTTIFPGA----------- 445
            .|...:  |||..              :...|.:|.|||:.:|..||.|.||.|           
Zfish   342 HDSGPV--YPETACTHTRLAANTTSPFQTSCRYITVLFYLNNVQEGGETTFPVADNRTYEEASLI 404

  Fly   446 ----------------QLAIQPKKGSALFWYNLHNN-----GDPNLLTRHAVCPTIVGSRWVLVK 489
                            .|.::|.||:|:||||..::     |:.:..:.|..|....|::|| ..
Zfish   405 QNDVDLLDTRKHCDKGNLRVKPVKGTAVFWYNYLSDGRGWVGEQDEYSLHGGCVVTQGTKWV-AN 468

  Fly   490 SMLNYEQMFKK 500
            :.:|.:..:::
Zfish   469 NWINVDPDYQR 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34345NP_001097101.1 P4Ha_N 40..170 CDD:285528 8/29 (28%)
P4Hc 324..489 CDD:214780 42/210 (20%)
p4htmbXP_001340234.2 EF-hand_7 204..262 CDD:290234 12/58 (21%)
EFh 204..262 CDD:298682 12/58 (21%)
P4Hc 285..471 CDD:214780 47/232 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583460
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1438683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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