DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34345 and p4ha1a

DIOPT Version :9

Sequence 1:NP_001097101.1 Gene:CG34345 / 5740402 FlyBaseID:FBgn0085374 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_009304776.1 Gene:p4ha1a / 562774 ZFINID:ZDB-GENE-040724-91 Length:541 Species:Danio rerio


Alignment Length:574 Identity:150/574 - (26%)
Similarity:251/574 - (43%) Gaps:139/574 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LFTVCKAKKAENDVVQEVIYSNSIRALSELREIENSYMEHLNNYVSFLQQKIKTLRIF---INSL 79
            |.::.|:..|.:|      :..||..:::|...|...:..|.:|:...:.|::.::.:   :::|
Zfish    12 LISLLKSSSAHSD------FFTSIGHMTDLLFTEKDLVTSLKDYIKAEESKLEQVKQWAEKLDAL 70

  Fly    80 TPNYLDHKVDRYKYVSNPLNSFGLLRRAHQDWPKL-IAYLKDQGNIKVDIEEMNKLINRT--PHA 141
            |...:.   |...::.:|:|:|.|::|.:.:|.:: ...|||..:..:.    |..|.|.  |:.
Zfish    71 TATAVQ---DPEGFLGHPVNAFKLMKRLNTEWGEVEDLVLKDMSDGFIS----NLTIQRQYFPND 128

  Fly   142 NDMEEALMGMDRIEHFYDLK----SSDMAQGLVAGQQLSSRMSASDCLAL-------ADY----- 190
            .|...|...:.|::..|.|.    ||....|:..|....|.::..||..|       |||     
Zfish   129 EDQNGAAKALLRLQDTYKLDTQTISSGDLPGVNTGLPYKSTLTVEDCFELGKIAYSDADYYHTEL 193

  Fly   191 -----------------------------MYKRSEFRRAAEWYRIALSVFTKPKNNIA------F 220
                                         :|::.|..||.|:.:..|:|  :|::..|      |
Zfish   194 WMAQALKQLDEGEESSVEIATALDYLSYSVYQQGELERALEYTKRLLTV--EPEHQRALGNLKYF 256

  Fly   221 KFYAPKRKELEKMFVISRLQEGSVENLTDCLKELSQDPNNSLVHLRPRKSPTMIEQGCQG---KF 282
            .:...|:|:.||            |..|....:..|:.::......|.|  ...|:.|:|   |.
Zfish   257 DYQLAKQKKAEK------------EQSTKEESKKEQETSDGKKEYLPEK--RKYEKLCRGEGLKM 307

  Fly   283 PPGPQ--LVCRY-NSTTTPFMRIAPLKEEEISRDPLIWLYHDVIYDSEIAQLTNVTREEMILGTT 344
            .|..|  |.||| |....||..|.|:|:|:....|.|..||::|.:.||.::..:::..:...|.
Zfish   308 TPRRQKHLFCRYFNGNRHPFYTIGPVKQEDEWDRPRIIRYHEIITEQEIEKIKELSKPRLRRATI 372

  Fly   345 TN---------------------YTTP--DRVNRLFHIKVTDDDGGKLDKTLVNRMADISGLDVG 386
            :|                     |..|  ||:|:                    |:.||:||:|.
Zfish   373 SNPITGVLETAHYRISKSAWLAAYEHPVVDRINQ--------------------RIEDITGLNVK 417

  Fly   387 NTTTLARINYGLGGYFQEHSDYMDIKLYPELTEE---GDRLMTFLFYMTDVPVGGTTIFPGAQLA 448
            ....|...|||:||.::.|.|: ..|..|:..:|   |:|:.|:||||:||..||.|:||....|
Zfish   418 TAEELQVANYGVGGQYEPHFDF-GRKDEPDAFKELGTGNRIATWLFYMSDVAAGGATVFPEVGAA 481

  Fly   449 IQPKKGSALFWYNLHNNGDPNLLTRHAVCPTIVGSRWVLVKSMLNYEQMFKKPC 502
            ::|.||:|:|||||..:|:.:..||||.||.:||::||..|.:....|.|::||
Zfish   482 VKPLKGTAVFWYNLFPSGEGDYSTRHAACPVLVGNKWVSNKWIHERGQEFRRPC 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34345NP_001097101.1 P4Ha_N 40..170 CDD:285528 31/139 (22%)
P4Hc 324..489 CDD:214780 61/190 (32%)
p4ha1aXP_009304776.1 P4Ha_N 28..157 CDD:285528 30/135 (22%)
TPR repeat 172..207 CDD:276809 6/34 (18%)
TPR repeat 212..242 CDD:276809 6/29 (21%)
Fis1 218..262 CDD:304536 10/45 (22%)
P4Hc 352..525 CDD:214780 62/193 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583435
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1438683at2759
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.850

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