DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34345 and PH4alphaNE2

DIOPT Version :9

Sequence 1:NP_001097101.1 Gene:CG34345 / 5740402 FlyBaseID:FBgn0085374 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_733378.1 Gene:PH4alphaNE2 / 43628 FlyBaseID:FBgn0039783 Length:542 Species:Drosophila melanogaster


Alignment Length:559 Identity:149/559 - (26%)
Similarity:261/559 - (46%) Gaps:101/559 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLNWILLFL----FTVCKAKKAENDVVQEVIYSNSIRALSELREIENSYMEHLNNYVSFLQQKIK 70
            :|.|.|:.|    .::...:..||:..|.  ::.|:..:.::..:|:..:.::......|.:|.|
  Fly     1 MLFWRLVLLGMLYLSLSFGQLRENNAQQR--FARSVVNMDDMLNLEDDLVSNVEKLAEALARKAK 63

  Fly    71 TLRIFINSLTPNYLDHKVDRYKYVSNPLNSFGLLRRAHQDWPKLIAYLKDQGNIKVDIEEMNKLI 135
            |::..:..:.....::| ...:..:||:::|.|:|....:|...:.||:    ..|..||:..:.
  Fly    64 TIKWGVFKMMKRRQEYK-SSMEIFANPIDTFSLIRHMQSNWLMWLLYLE----TPVGQEELFFVD 123

  Fly   136 NR---TPHANDMEEALMGMDRIEHFYDLKSSDMAQGLVAGQQLSSRMSASDCLALADYMYKRSEF 197
            :|   .|...|..:|..|:.:::..|.:.|||:|:||:.|.|.:|.:...||||:..::...|.:
  Fly   124 SRMPLLPKYFDFIDAAEGIRKMQATYQMFSSDIAKGLLDGVQYNSSLKPIDCLAIGLHLMNNSRW 188

  Fly   198 RRAAEWYRIALSVFTKPKNNIAFKFY-APKRKELEKMF----VISRLQEGSVE------------ 245
            ..|.:|...::..:.:..:....:.. .||..:|.::.    :..|..||:::            
  Fly   189 YAAEQWISASIEAYDQKSSQTDMELLRGPKLADLCRILGQVQMKQRNHEGALQAYQVALKLSPHD 253

  Fly   246 ---------------NLTDCLKELSQDPNNSLVHLRPRKSPTMIEQGCQGK--FPPG-PQLVCRY 292
                           .|:| ::.:.||.:||  |.|     .::...|.|:  .|.. ..|.|.|
  Fly   254 PEIYEEYRILEKRDLTLSD-IEPIEQDKDNS--HER-----LVLPPCCSGRCQVPRNLSNLYCVY 310

  Fly   293 NSTTTPFMRIAPLKEEEISRDPLIWLYHDVIYDSEIAQLTNVTREEMILGTTTNYTTPDRVNRLF 357
            |..|:||:::||:|.|.:|.||.:.|.||:|...|...:...::|.|:...||:   ||      
  Fly   311 NHVTSPFLQLAPIKTEILSIDPFVVLLHDMISQKESTLIRTSSKEHMLPSATTD---PD------ 366

  Fly   358 HIKVTDDDGGKLD------------------KTLVNRMADISGLDVGNTTTLARINYGLGGYFQE 404
                ..||..::|                  |.:..|:.|.:|||:.:|.....|||||||:|:.
  Fly   367 ----ASDDETQVDTYRTSKSVWYSSDFNDTTKKITERLGDATGLDMNSTEFYQVINYGLGGFFET 427

  Fly   405 HSDYMDIKLYPELTEE------GDRLMTFLFYMTDVPVGGTTIFPGAQLAIQPKKGSALFWYNLH 463
            |.|.:       |:|:      .||:.|.|||:.:|..||.|.||...|.:.|:.|||||||||.
  Fly   428 HLDML-------LSEKNRFNGTSDRIATTLFYLNEVRQGGGTYFPRLNLTVFPQPGSALFWYNLD 485

  Fly   464 NNGDPNLLTRHAVCPTIVGSRWVLVKSMLNYEQMFKKPC 502
            ..|:.::.:.|..||.||||:||:.|.:.:..|.|.:||
  Fly   486 TKGNDHMGSLHTGCPVIVGSKWVMSKWINDMGQEFTRPC 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34345NP_001097101.1 P4Ha_N 40..170 CDD:285528 29/132 (22%)
P4Hc 324..489 CDD:214780 62/188 (33%)
PH4alphaNE2NP_733378.1 P4Ha_N 33..161 CDD:285528 29/132 (22%)
TPR repeat 175..200 CDD:276809 6/24 (25%)
TPR_16 176..254 CDD:290168 11/77 (14%)
TPR repeat 219..249 CDD:276809 4/29 (14%)
TPR_2 220..253 CDD:285020 4/32 (13%)
P4Hc 342..513 CDD:214780 63/190 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461718
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28396
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
1110.910

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