DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34345 and PH4alphaEFB

DIOPT Version :9

Sequence 1:NP_001097101.1 Gene:CG34345 / 5740402 FlyBaseID:FBgn0085374 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_733371.1 Gene:PH4alphaEFB / 43620 FlyBaseID:FBgn0039776 Length:550 Species:Drosophila melanogaster


Alignment Length:545 Identity:153/545 - (28%)
Similarity:264/545 - (48%) Gaps:108/545 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IYSNSIRALSELREIENSYMEHLNNYVSFLQQKIKTLRIFINSLTPNYLDHKVDRYK-------- 92
            :|: ::..:.||.|.|:..:.:|..|:...:.|:            |:|.:|:|.|:        
  Fly    25 VYT-ALAEMEELLETESVLITNLEGYIRVQEDKL------------NFLKNKMDEYQREHSDASH 76

  Fly    93 ----YVSNPLNSFGLLRRAHQDWPKLIAYLK-DQG-NIKVDIEEMNKLINRTPHANDMEEALMGM 151
                |||||:|::.|.:|...||.::...:: |.| :...:|.:...|: :.|...|:..|.:.:
  Fly    77 DITAYVSNPINAYLLTKRLTTDWRQVENLMEHDVGTDFLQNITQYRSLL-KFPSDEDLNGAAVAL 140

  Fly   152 DRIEHFYDLKSSDMAQGLVAGQQLSSRMSASDCLALADYMYKRSEFRRAAEWYRIALSVFTKPKN 216
            .|::..|.|.:|.:|:|.:.|.|.|:.||:.||..|....|...::.....|...|::...:...
  Fly   141 LRLQDTYQLDTSSVARGKLNGIQYSTEMSSDDCFELGRQSYVNHDYYHTVLWMNEAMARMLEEPT 205

  Fly   217 NIAFKFYAPKRKELEKMFVISRLQEGSVEN---LTDCL------------------KELSQ---- 256
            |....|   .:.::.:....|..:||::|:   :|:.|                  ||::|    
  Fly   206 NHTQSF---TKADILEYLAFSTYKEGNIESALTMTNELLQLLPHHERANGNKRFYEKEIAQQLQL 267

  Fly   257 ----------------------DPNNSLVHLRPRKSPTMIEQGCQGKFPPGP----QLVCRYNST 295
                                  ||  ::..:..|::..|:   |:|:..|.|    .|.|||.:.
  Fly   268 RKMKGDDGTDEMPKSDLPVAKSDP--AIFDMTERRAYEML---CRGELKPSPSDLRSLRCRYVTN 327

  Fly   296 TTPFMRIAPLKEEEISRDPLIWLYHDVIYDSEIAQLTNVTR--------EEMILGT--TTNYTTP 350
            ..||:|:.|||.||:..||.|.:|||.:|||||..:..:.|        :..:.|.  |.||   
  Fly   328 RVPFLRLGPLKLEEVHADPYIVIYHDAMYDSEIDLIKRMARPRFRRATVQNSVTGALETANY--- 389

  Fly   351 DRVNRLFHIKVTDDDGGKLDKTLVNRMADISGLDVGNTTTLARINYGLGGYFQEHSDYM---DIK 412
             |:::...:|..:|   ::.:|:|.|.||::|||:.:...|..:|||:||:::.|.|:.   :.:
  Fly   390 -RISKSAWLKTQED---RVIETVVQRTADMTGLDMDSAEELQVVNYGIGGHYEPHFDFARKEEQR 450

  Fly   413 LYPELTEEGDRLMTFLFYMTDVPVGGTTIFPGAQLAIQPKKGSALFWYNLHNNGDPNLLTRHAVC 477
            .:..| ..|:|:.|.||||:||..||.|:|.....|:.||||:|.||.|||.:|..::.||||.|
  Fly   451 AFEGL-NLGNRIATVLFYMSDVEQGGATVFTSLHTALFPKKGTAAFWMNLHRDGQGDVRTRHAAC 514

  Fly   478 PTIVGSRWVLVKSMLNYEQMFKKPC 502
            |.:.|::||..|.:....|.|::||
  Fly   515 PVLTGTKWVSNKWIHERGQEFRRPC 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34345NP_001097101.1 P4Ha_N 40..170 CDD:285528 35/143 (24%)
P4Hc 324..489 CDD:214780 64/177 (36%)
PH4alphaEFBNP_733371.1 P4Ha_N 28..159 CDD:285528 35/143 (24%)
P4Hc 356..529 CDD:214780 65/180 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461813
Domainoid 1 1.000 91 0.514 Domainoid score I2609
eggNOG 1 0.900 - - E1_KOG1591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 79 1.000 Inparanoid score I2378
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 1 1.000 - - mtm1209
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
109.900

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