DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34345 and P4ha3

DIOPT Version :9

Sequence 1:NP_001097101.1 Gene:CG34345 / 5740402 FlyBaseID:FBgn0085374 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_038938408.1 Gene:P4ha3 / 361612 RGDID:735150 Length:549 Species:Rattus norvegicus


Alignment Length:487 Identity:113/487 - (23%)
Similarity:205/487 - (42%) Gaps:80/487 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 RALSELREIENSYMEHLNNYVSFLQQKIKTLRIFINSLTPNYLDHKVDRYKYVSNPLNSFGLLRR 106
            |||:..|.:    :..|..|:...:.:::.|..|.:.:...:.|.|:.    |.|||.:|.|::|
  Rat    39 RALAPERRL----LGTLRRYLRGEEARLRDLTRFYDKVLSLHEDLKIP----VVNPLLAFTLIKR 95

  Fly   107 AHQDWPKLIAYLKDQGNIKVDIEEMNKLINRTPHANDMEEALMGMDRIEHFYDLKSSDMAQGL-- 169
            ...||..::..|:...||:...:...|:....|...|:|.|...:.|::..|.|....:|||:  
  Rat    96 LQSDWRNVVHSLEATENIRALKDGYEKVEQDLPAFEDLEGAARALMRLQDVYMLNVKGLAQGVFQ 160

  Fly   170 -VAGQQLSS--------RMSASDCLALADYMYKRSEFRRAAEWYRIALSVFTK------------ 213
             |.|..::.        .::|.||..:....|...::..|..|...|:|:|.:            
  Rat   161 RVTGSSITDLYSPRQLFSLTADDCFQVGKVAYDTGDYYHAIPWLEEAVSLFRRSYGEWKTEDEAS 225

  Fly   214 -------------PKNNIA--------FKFYAPKRKELEKMFVISRLQEGSVENLTDCLKELS-Q 256
                         ...|::        |..|:|..|.:.:.  :.:.:....||......|.: |
  Rat   226 LEDALDYLAFACYQVGNVSCALSLSREFLVYSPDNKRMARN--VLKYERLLAENGHLMAAETAIQ 288

  Fly   257 DPNNSLVHLRPRKSPTMIEQGCQ--GKFPPG---PQLVCRYNSTTTPFMRIAPLKEEEISRDPLI 316
            .||  :.||:.|.:   .|..||  |..|..   |.|.|.|.:.::|::.:.|.::|.|...||:
  Rat   289 RPN--VPHLQTRDT---YEGLCQTLGSQPTHYQIPSLYCSYETNSSPYLLLQPARKEVIHLRPLV 348

  Fly   317 WLYHDVIYDSEIAQLTNVT----REEMILGTTTNYTTPDRVNRLFHIKVTDDDGGKLDKTLVNRM 377
            .||||.:.|.|..::..:.    :..::...........|:::...:|.|.|   .:..||..|:
  Rat   349 ALYHDFVSDEEAQKIRELAEPWLQRSVVASGEKQLQVEYRISKSAWLKDTVD---PVLVTLDRRI 410

  Fly   378 ADISGLDV--GNTTTLARINYGLGGYFQEHSDYM---DIKLYPELTEEGDRLMTFLFYMTDVPVG 437
            |.::|||:  .....|..:|||:||:::.|.|:.   ...||.  .:.|:|:.|.:.|::.|..|
  Rat   411 AALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYK--MKSGNRVATLMIYLSSVEAG 473

  Fly   438 GTTIFPGAQLAIQPKKGSALFWYNL-HNNGDP 468
            |.|.|.....::...|.....:.:: .|:.||
  Rat   474 GATAFIYGNFSVPVVKWPTSGYTSMDRNSEDP 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34345NP_001097101.1 P4Ha_N 40..170 CDD:285528 33/130 (25%)
P4Hc 324..489 CDD:214780 36/155 (23%)
P4ha3XP_038938408.1 P4Ha_N 34..108 CDD:400573 19/76 (25%)
P4Hc 356..>478 CDD:214780 31/126 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343164
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1438683at2759
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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