DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34345 and dpy-18

DIOPT Version :9

Sequence 1:NP_001097101.1 Gene:CG34345 / 5740402 FlyBaseID:FBgn0085374 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_499464.1 Gene:dpy-18 / 176569 WormBaseID:WBGene00001077 Length:559 Species:Caenorhabditis elegans


Alignment Length:507 Identity:139/507 - (27%)
Similarity:232/507 - (45%) Gaps:50/507 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SIRALSELREIENSYMEHLNNYVSFLQQKIKTLRIFINSLTPNYLDHK----VDRYKYVSNPLNS 100
            ||..:..|.|.|.:..:.|:.|:...::::..|:    .|:..|....    .:..|.::||:|:
 Worm    21 SIADMQNLLETERNIPKILDKYIHDEEERLVQLK----KLSEEYSKKNEISIENGLKDITNPINA 81

  Fly   101 FGLLRRAHQDWPKLIAYL--KDQGNIKVDIEEMNKLINRTPHANDMEEALMGMDRIEHFYDLKSS 163
            |.|::|...||.::.:.:  ...||:...|.:.:..: |.|.|:|:..|.:|:.|::..|.|.:.
 Worm    82 FLLIKRKIFDWKEIESKMNANKAGNVVSSITDDSYGV-RYPTADDLSGAAIGLLRLQDTYRLDTK 145

  Fly   164 DMAQGLVAGQQLSSRMSASDCLALADYMYKRSEFRRAAEWYRIA---LSVFTKPK-------NNI 218
            |:|.|.:...|.:...||.||..:|...|...:|.....|...|   |....:|.       ..:
 Worm   146 DLADGKIYADQGNYTFSAKDCFEIARAAYNEHDFYHTVMWMEEAQRRLGDEVEPTVEVEDILEYL 210

  Fly   219 AFKFYAPKR--------KELEKMFVISRLQEGSVENLTDCLKE---LSQDPNNSLVHLRPRK--- 269
            ||..|....        :||.||.......:|:|:...|.|::   ...|...:|..::.|:   
 Worm   211 AFALYKQNNLKHALKLTEELYKMNPTHPRAKGNVKWYEDLLEQEGVRRSDMRKNLPPIQNRRPDS 275

  Fly   270 -----SPTMIEQGCQGKFPPGPQLVCR---YNSTTTPFMRIAPLKEEEISRDPLIWLYHDVIYDS 326
                 ..||.|..|:.:.|...:.:.|   |.....||:..||:|.|....:||..|:.|||.|.
 Worm   276 VLGNTERTMYEALCRNEVPVSQKDISRLYCYYKRDRPFLVYAPIKVEIKRFNPLAVLFKDVISDD 340

  Fly   327 EIAQLTNVTREEMILGTTTNYTTPDRVNRLFHIKVT---DDDGGKLDKTLVNRMADISGLDVGNT 388
            |:|.:..:.:.::...|..:..|...|...:.|..:   .:..|.:.:|:..|:..::.|::...
 Worm   341 EVAAIQELAKPKLARATVHDSVTGKLVTATYRISKSAWLKEWEGDVVETVNKRIGYMTNLEMETA 405

  Fly   389 TTLARINYGLGGYFQEHSDYM---DIKLYPELTEEGDRLMTFLFYMTDVPVGGTTIFPGAQLAIQ 450
            ..|...|||:||::..|.|:.   :.|.:..| ..|:|:.|.||||:....||.|:|..|:..|.
 Worm   406 EELQIANYGIGGHYDPHFDHAKKEESKSFESL-GTGNRIATVLFYMSQPSHGGGTVFTEAKSTIL 469

  Fly   451 PKKGSALFWYNLHNNGDPNLLTRHAVCPTIVGSRWVLVKSMLNYEQMFKKPC 502
            |.|..|||||||:..||.|..||||.||.:||.:||..|.:......|::||
 Worm   470 PTKNDALFWYNLYKQGDGNPDTRHAACPVLVGIKWVSNKWIHEKGNEFRRPC 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34345NP_001097101.1 P4Ha_N 40..170 CDD:285528 34/135 (25%)
P4Hc 324..489 CDD:214780 56/170 (33%)
dpy-18NP_499464.1 P4Ha_N 21..152 CDD:285528 34/135 (25%)
P4Hc 338..511 CDD:214780 57/173 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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