DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34345 and p4ha3

DIOPT Version :9

Sequence 1:NP_001097101.1 Gene:CG34345 / 5740402 FlyBaseID:FBgn0085374 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_031752143.1 Gene:p4ha3 / 100495824 XenbaseID:XB-GENE-962355 Length:547 Species:Xenopus tropicalis


Alignment Length:538 Identity:132/538 - (24%)
Similarity:234/538 - (43%) Gaps:98/538 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IYSNSIRALSELREIENSYMEHLNNYVSFLQQKIKTLRIFINSLTPNYLDHKVDRYKYVSNPLNS 100
            :|| |:.::.:...:|.:.::||..|:....|::..||.|...:..:   |:... ..|.:|:.:
 Frog    31 MYS-SMASIQQAVGMEGALLQHLGQYLQQETQRLSDLRRFYEKVQAS---HQAGG-PPVQDPILA 90

  Fly   101 FGLLRRAHQDWPKLIAYLKDQGNIKVDIEEMNKLINRTPHANDMEEALMGMDRIEHFYDLKSSDM 165
            :.||:|...:|..::...:...||:...|...|:....|...|:|.|...:.|::..|.|..:.:
 Frog    91 YTLLKRLQSEWMNVVHSSEANENIQALKEGYEKVKQDLPAPEDVEGAAKALMRLQDVYSLNVNGL 155

  Fly   166 AQGLVAGQQLS-----------SRMSASDCLALADYMYKRSEFRRAAEWYRIALSVFTKPKNN-- 217
            |:|:......|           |.|||.||..:....|...::..:..|...|:|.|.....|  
 Frog   156 ARGMFQRSSSSDTKLLYNPPHLSIMSADDCFHIGKVAYDMEDYYHSIPWLEEAVSRFRGSYGNWR 220

  Fly   218 -------------IAFKFYAPKRKELEKMFVISRLQEGSVENLTDCLKE-LSQDPNN-------- 260
                         :||.:|                :.|::.:..|..:| |..||:|        
 Frog   221 TEDEGSLEEALDYLAFSYY----------------KAGNISHALDLSRECLLYDPDNGRLARNIA 269

  Fly   261 ------------------------SLVHLRPRKSPTMIEQGCQ--GKFPPG---PQLVCRYNSTT 296
                                    ::.||:.|   .:.|..||  |..|..   |.:.|.|::.:
 Frog   270 KYEQILYESPTADADAEEMKLQRPNVTHLKTR---DLYEGLCQTLGSQPTSYEDPHMSCMYDTNS 331

  Fly   297 TPFMRIAPLKEEEISRDPLIWLYHDVIYDSE---IAQLTNVTREEMILGTTTNYTTPD-RVNRLF 357
            .|::.:.|:|:|.:|..|.:.||||.:.|.|   |.:|.:......::.:.......: |:::..
 Frog   332 HPYLLLQPMKKEIVSLRPQVVLYHDFVSDLEAEKIKELASPWLHRSVVASGEKQAEAEYRISKSA 396

  Fly   358 HIKVTDDDGGKLDKTLVNRMADISGLDV--GNTTTLARINYGLGGYFQEHSDYMDIKLYP-ELTE 419
            .:|   |......:.|..|::.::||:.  .....|..:|||:||:::.|.|:...:..| ..|.
 Frog   397 WLK---DTIHPFVQNLDTRISAVTGLNAHPPYAEYLQVVNYGIGGHYEPHFDHATSRKSPLYRTN 458

  Fly   420 EGDRLMTFLFYMTDVPVGGTTIFPGAQLAIQPKKGSALFWYNLHNNGDPNLLTRHAVCPTIVGSR 484
            .|:||.||:.|::.|.:||:|.|..|..:....|.:|:||:|||.||..:..|.||.||.|:||:
 Frog   459 TGNRLATFMIYLSHVDLGGSTAFVFANFSSPVVKNAAVFWWNLHRNGLGDEDTLHAGCPVIIGSK 523

  Fly   485 WVLVKSMLNYEQMFKKPC 502
            ||..|.:..:.|.|.:||
 Frog   524 WVANKWIHEFGQEFHRPC 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34345NP_001097101.1 P4Ha_N 40..170 CDD:285528 29/129 (22%)
P4Hc 324..489 CDD:214780 52/171 (30%)
p4ha3XP_031752143.1 P4Ha_N 35..>104 CDD:400573 15/72 (21%)
TPR repeat 182..210 CDD:276809 6/27 (22%)
TPR repeat 215..257 CDD:276809 8/57 (14%)
P4Hc 359..531 CDD:214780 53/174 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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