DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34345 and p4ha1

DIOPT Version :9

Sequence 1:NP_001097101.1 Gene:CG34345 / 5740402 FlyBaseID:FBgn0085374 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_031761963.1 Gene:p4ha1 / 100490484 XenbaseID:XB-GENE-987760 Length:526 Species:Xenopus tropicalis


Alignment Length:552 Identity:150/552 - (27%)
Similarity:252/552 - (45%) Gaps:104/552 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LLFLFTVCKAKKAENDVVQEVIYSNSIRALSELREIENSYMEHLNNYVSFLQQKIKTLRIFINSL 79
            ||.||:...|.           :..||..:.:|...|...:..|.:|:...:||:..::.:.:. 
 Frog     9 LLGLFSCAHAD-----------FFTSIGHMIDLLNTEKDLVTSLKDYIKAEEQKLAQIKKWADK- 61

  Fly    80 TPNYLDHKVDRYK-----YVSNPLNSFGLLRRAHQDWPKLIAYLKDQGNIKVDIEE---MNKLIN 136
                |||..|...     |:.:|:|:|.|::|.:.:|.||      :..|..||.:   .|..|.
 Frog    62 ----LDHLTDTATKDPEGYLGHPVNAFKLMKRLNTEWVKL------ENLILKDISDGFISNLTIQ 116

  Fly   137 RT--PHANDMEEALMGMDRIEHFYDLKSSDMAQGLVAGQQLSSRMSASDCLALADYMYKRSEFRR 199
            |.  |:..|...|...:.|::..|:|.:..:::|.:.|.:..:.::|.||..|....|..:::..
 Frog   117 RQYFPNDEDQTGAAKALLRLQDTYNLDTDTISKGNLPGVKHKTSLTAEDCFDLGKTAYTDADYYH 181

  Fly   200 AAEWYRIALSVFTKPKNNIAFKFYAPKRKELEKMFVISRL-----QEGSVEN-LTDCLKELSQDP 258
            ...|...|||           :..|.:...|:|:.|:..|     |:|.::. ||...:.|..||
 Frog   182 TELWMEQALS-----------QLDAGEESSLDKVMVLDYLSYAVYQQGDLDKALTLTKRSLELDP 235

  Fly   259 -----NNSLVH------------------LRPRK-------SPTMIEQGCQGKFPPG-------- 285
                 |.:|.|                  ||.||       .....|:.|:|:   |        
 Frog   236 EHQRGNGNLRHIMSKESNKSSSSPSEGAELRTRKGRPKDHLEKEKYEKLCRGE---GVKMTSRRQ 297

  Fly   286 PQLVCRY-NSTTTPFMRIAPLKEEEISRDPLIWLYHDVIYDSEIAQLTNVTREEMILGTTTN--- 346
            .:|.||| :....|.:.::|.|:|:....|.|..|||:|.|.||:::..:.:..:...|.:|   
 Frog   298 KRLFCRYFDGKKDPLLILSPTKQEDEWDKPRIVRYHDIISDEEISKVKELAKPRLRRATISNPIT 362

  Fly   347 ---YTTPDRVNRLFHIKVTDDDGGKLDKTLVNRMADISGLDVGNTTTLARINYGLGGYFQEHSDY 408
               .|...|:.:...:...:|   .:...|..|:..::|||:.....|...|||:||.::.|.|:
 Frog   363 GVLETAQYRITKSAWLSGYED---PVVARLNRRIEGVTGLDMSTAEELQVANYGIGGQYEPHFDF 424

  Fly   409 MDIKLYPELTEE---GDRLMTFLFYMTDVPVGGTTIFPGAQLAIQPKKGSALFWYNLHNNGDPNL 470
            :. |..|:..::   |:|:.|:||||:||..||.|:||....|:.||||:|:|||||..:|:.:.
 Frog   425 LR-KYEPDAFKKLGTGNRVATWLFYMSDVEAGGATVFPEVGAAVYPKKGTAVFWYNLLESGEGDY 488

  Fly   471 LTRHAVCPTIVGSRWVLVKSMLNYEQMFKKPC 502
            .||||.||.:||::||..|.:....|.|::||
 Frog   489 STRHAACPVLVGNKWVSNKWIHERGQEFRRPC 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34345NP_001097101.1 P4Ha_N 40..170 CDD:285528 34/139 (24%)
P4Hc 324..489 CDD:214780 59/173 (34%)
p4ha1XP_031761963.1 P4Ha_N 24..111 CDD:400573 23/97 (24%)
P4Hc 337..510 CDD:214780 60/176 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

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