DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34267 and CG13062

DIOPT Version :9

Sequence 1:NP_001097464.1 Gene:CG34267 / 5740365 FlyBaseID:FBgn0085296 Length:77 Species:Drosophila melanogaster
Sequence 2:NP_648871.3 Gene:CG13062 / 39799 FlyBaseID:FBgn0036603 Length:118 Species:Drosophila melanogaster


Alignment Length:113 Identity:26/113 - (23%)
Similarity:46/113 - (40%) Gaps:37/113 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFRIIAVIFALVAMAFAAPGY-------------------IEPSYGVVPVA---QVVPVVKSVP- 42
            |.:::..:.::.|:..|.||:                   :||.:..:|.|   |...||.||| 
  Fly     1 MMKLVVSLLSICALTAARPGFLHGHHHHYPEIPYYPHHHHVEPLHYHLPAAVSHQSSTVVHSVPH 65

  Fly    43 -VVQHVPVVKNVPVVQHVPVLKSY----AVPTY---------GHHIYH 76
             :::.|.:...|..|.|.|::|:|    .:..|         .||.:|
  Fly    66 HIIKPVLLPTVVKTVVHPPIIKAYHPAPIIKAYHPYDPFHLHHHHDFH 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34267NP_001097464.1 None
CG13062NP_648871.3 Retinin_C 32..95 CDD:282395 17/62 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR34931
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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