DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and Cyp2c23

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_114027.2 Gene:Cyp2c23 / 83790 RGDID:620370 Length:494 Species:Rattus norvegicus


Alignment Length:588 Identity:140/588 - (23%)
Similarity:243/588 - (41%) Gaps:141/588 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 YVLFAIAITIILISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINLLGRFQY 71
            :...|:.:::..:|.:.:..|.:.:     |.|           .|||.|.|||||:     .|.
  Rat     6 FTTLALVVSVTCLSLLSVWTKLRTR-----GRL-----------PPGPTPLPIIGNL-----LQL 49

  Fly    72 N----PFYGFGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGR---PDFFRYHKL 129
            |    | .....|.|:||.:|:|..|.:..:|::..|::||.|.:.|..|.||   |.....||.
  Rat    50 NLKDIP-ASLSKLAKEYGPVYTLYFGTSPTVVLHGYDVVKEALLQQGDEFLGRGPLPIIEDTHKG 113

  Fly   130 FG-----GDRNNSLALCDWSQLQQ------KRRNLARRHCSPRESSSYFSKMSEIGGLEVNQLLD 183
            :|     |:|        |..:::      :...:.:|....|...            |...|::
  Rat   114 YGLIFSNGER--------WKVMRRFSLMTLRNFGMGKRSLEERVQE------------EARCLVE 158

  Fly   184 QLTNISSGYPCDVKPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQGYSFDYIP 248
            :|.. :...|.|...::..|..|:.|..:.:.||.|::|.|..:::..::.|.::|..:...|..
  Rat   159 ELQK-TKAQPFDPTFILACAPCNVICSILFNDRFQYNNKTFLNLMDLLNKNFQQVNSVWCQMYNL 222

  Fly   249 W--LVPF----YCNHISRIVHWSASIRKFILERIVNHRESNININEPDKDFTDALLKSLKEDKNV 307
            |  ::.:    :.....||    ..::.||||::..|::|....|  .:|:.|..|..::|:|:.
  Rat   223 WPTIIKYLPGKHIEFAKRI----DDVKNFILEKVKEHQKSLDPAN--PRDYIDCFLSKIEEEKDN 281

  Fly   308 SRNTIIFMLED--------FIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICL 364
            .::.  |.||:        |..|.......:...|..:.|.|.:...:..|:|.|..:. :...:
  Rat   282 LKSE--FHLENLAVCGSNLFTAGTETTSTTLRFGLLLLMKYPEVQAKVHEELDRVIGRH-QPPSM 343

  Fly   365 YDMNVMPYTMASISEVLRY----SSSPIVPHVAMEDTVIKGFGVRKGTIV--FINNYVLNMSESF 423
            .|...:|||.|.:.|:.||    .||  :||..::||..:.:.:.|||.|  .:::.:|:..|  
  Rat   344 KDKMKLPYTDAVLHEIQRYITLLPSS--LPHAVVQDTKFRDYVIPKGTTVLPMLSSVMLDQKE-- 404

  Fly   424 WNHPEQFDPERFLENNFTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIP 488
            :.:||:|||..||:.|                          |..|...|               
  Rat   405 FANPEKFDPGHFLDKN--------------------------GCFKKTDY--------------- 428

  Fly   489 QFLPFSVGKRTCIGQSLVRGFGFLLLANIIQNYN----VNSADFSKIKLEKSSIALPKKCFKLSL 549
             |:|||:|||.|:|:||.|...||....::|.::    |...|.....:....|.||.. :||.|
  Rat   429 -FVPFSLGKRACVGESLARMELFLFFTTLLQKFSLKTLVEPKDLDIKPITTGIINLPPP-YKLCL 491

  Fly   550 RPR 552
            .||
  Rat   492 VPR 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 132/538 (25%)
Cyp2c23NP_114027.2 p450 34..491 CDD:278495 132/539 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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