DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and Cyp2c23

DIOPT Version :10

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_114027.2 Gene:Cyp2c23 / 83790 RGDID:620370 Length:494 Species:Rattus norvegicus


Alignment Length:588 Identity:140/588 - (23%)
Similarity:243/588 - (41%) Gaps:141/588 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 YVLFAIAITIILISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINLLGRFQY 71
            :...|:.:::..:|.:.:..|.:.:     |.|           .|||.|.|||||:     .|.
  Rat     6 FTTLALVVSVTCLSLLSVWTKLRTR-----GRL-----------PPGPTPLPIIGNL-----LQL 49

  Fly    72 N----PFYGFGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGR---PDFFRYHKL 129
            |    | .....|.|:||.:|:|..|.:..:|::..|::||.|.:.|..|.||   |.....||.
  Rat    50 NLKDIP-ASLSKLAKEYGPVYTLYFGTSPTVVLHGYDVVKEALLQQGDEFLGRGPLPIIEDTHKG 113

  Fly   130 FG-----GDRNNSLALCDWSQLQQ------KRRNLARRHCSPRESSSYFSKMSEIGGLEVNQLLD 183
            :|     |:|        |..:::      :...:.:|....|...            |...|::
  Rat   114 YGLIFSNGER--------WKVMRRFSLMTLRNFGMGKRSLEERVQE------------EARCLVE 158

  Fly   184 QLTNISSGYPCDVKPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQGYSFDYIP 248
            :|.. :...|.|...::..|..|:.|..:.:.||.|::|.|..:::..::.|.::|..:...|..
  Rat   159 ELQK-TKAQPFDPTFILACAPCNVICSILFNDRFQYNNKTFLNLMDLLNKNFQQVNSVWCQMYNL 222

  Fly   249 W--LVPF----YCNHISRIVHWSASIRKFILERIVNHRESNININEPDKDFTDALLKSLKEDKNV 307
            |  ::.:    :.....||    ..::.||||::..|::|....|  .:|:.|..|..::|:|:.
  Rat   223 WPTIIKYLPGKHIEFAKRI----DDVKNFILEKVKEHQKSLDPAN--PRDYIDCFLSKIEEEKDN 281

  Fly   308 SRNTIIFMLED--------FIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICL 364
            .::.  |.||:        |..|.......:...|..:.|.|.:...:..|:|.|..:. :...:
  Rat   282 LKSE--FHLENLAVCGSNLFTAGTETTSTTLRFGLLLLMKYPEVQAKVHEELDRVIGRH-QPPSM 343

  Fly   365 YDMNVMPYTMASISEVLRY----SSSPIVPHVAMEDTVIKGFGVRKGTIV--FINNYVLNMSESF 423
            .|...:|||.|.:.|:.||    .||  :||..::||..:.:.:.|||.|  .:::.:|:..|  
  Rat   344 KDKMKLPYTDAVLHEIQRYITLLPSS--LPHAVVQDTKFRDYVIPKGTTVLPMLSSVMLDQKE-- 404

  Fly   424 WNHPEQFDPERFLENNFTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIP 488
            :.:||:|||..||:.|                          |..|...|               
  Rat   405 FANPEKFDPGHFLDKN--------------------------GCFKKTDY--------------- 428

  Fly   489 QFLPFSVGKRTCIGQSLVRGFGFLLLANIIQNYN----VNSADFSKIKLEKSSIALPKKCFKLSL 549
             |:|||:|||.|:|:||.|...||....::|.::    |...|.....:....|.||.. :||.|
  Rat   429 -FVPFSLGKRACVGESLARMELFLFFTTLLQKFSLKTLVEPKDLDIKPITTGIINLPPP-YKLCL 491

  Fly   550 RPR 552
            .||
  Rat   492 VPR 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 CYP1_2-like 85..547 CDD:410710 115/499 (23%)
Cyp2c23NP_114027.2 CYP2C-like 65..489 CDD:410758 116/500 (23%)

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