DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spok and CYP71B12

DIOPT Version :10

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_197895.1 Gene:CYP71B12 / 832584 AraportID:AT5G25130 Length:496 Species:Arabidopsis thaliana


Alignment Length:584 Identity:126/584 - (21%)
Similarity:220/584 - (37%) Gaps:138/584 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IAITIILISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINLLGRFQYNPFYG 76
            :::..|::::||.      .:.:::.::.:.||    :..|||...|||||::.||.   .|...
plant     1 MSLWYIIVAFVFF------SSMIIVRIIRKTKK----NLPPGPPRLPIIGNLHQLGS---KPHRS 52

  Fly    77 FGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPD---------------FFRY 126
            ...|::.||.:.||..|....:|.:..:.:||||.........||:               |..|
plant    53 MFKLSETYGPLMSLKFGSVSTVVASTPETVKEVLKTFDVECCSRPNMTYPARVTYNLKDLCFSPY 117

  Fly   127 HKLFGGDRNNSLALCDWSQLQQKRRNLARRHCSPRESSSYFSKMSEIGGLEVNQLLDQLTNISSG 191
            .|.             |.::  ::..:...:.:.|..|...::..|:..|.  ..:.|..::.. 
plant   118 SKY-------------WREV--RKMTVVELYTAKRVQSFQHTRKEEVAALV--DFIKQAASLEK- 164

  Fly   192 YPCDVKPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQGY-----SF---DYIP 248
             |.::...::..|.::.|:    |.|..:.:| .|:...::|:.    ||.     ||   ||.|
plant   165 -PVNLNKKLMKLSGSVICR----VAFGINLQG-SKLENTYEEVI----QGTVELVGSFAAADYFP 219

  Fly   249 WLVPFYCNHISRIVHWSASIRK-------FILERIVNHRESNININEPDKDFTDALLK------S 300
            .:...    |.||....:...|       |..:.|.:|.|..| |.:   |..|.|||      :
plant   220 VVGRI----IDRITGLHSKCEKLFKAMDAFFDQSIKHHLEDEI-IKD---DIIDLLLKMERGETT 276

  Fly   301 LKEDKNVSRNTIIFMLEDFIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLY 365
            |.|.:....:|...:......|......::...:.|:..||.:....:.||..| .|....|...
plant   277 LGEFQLTRDHTKGILANILNAGIDTSAQVMTWVMTYLISNPRVLKKAQAEVREV-IKHKDDIIEE 340

  Fly   366 DMNVMPYTMASISEVLRYSSSPIV----PHVAMEDTVIKGFGVRKGTIVFINNYVLNMSESFWNH 426
            |:..:.|....|.|..|.  :|:|    |..|.:|..|.|:.:.|.|.:.:|.:.::.:.:.|..
plant   341 DIERLQYLKMVIKETFRI--NPLVPLLIPREASKDVKIGGYNIPKKTWIHVNIWAIHRNPNVWKD 403

  Fly   427 PEQFDPERFLENNFTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFL 491
            ||.|.||||:::..           |.|...|                              :.|
plant   404 PEAFIPERFMDSQI-----------DYKGLNF------------------------------ELL 427

  Fly   492 PFSVGKRTCIGQSLVRGFGFLLLANIIQNYNVNSADFSK---IKLEKS-SIALPKKCFKLSLRP 551
            ||..|:|.|.|..:......|.|.|::..::....:..|   :.||:| .:..||| ..|.|.|
plant   428 PFGSGRRICPGIGMGMALVHLTLINLLYRFDWKLPEGMKVADVDLEESYGLVCPKK-IPLQLIP 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 CYP1_2-like 85..547 CDD:410710 105/505 (21%)
CYP71B12NP_197895.1 CYP71-like 59..486 CDD:410695 106/507 (21%)

Return to query results.
Submit another query.