DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spok and TT7

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_196416.1 Gene:TT7 / 830693 AraportID:AT5G07990 Length:513 Species:Arabidopsis thaliana


Alignment Length:572 Identity:133/572 - (23%)
Similarity:229/572 - (40%) Gaps:110/572 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ITIILISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQ--APGPHPWPIIGNINLLGRFQYNPFYG 76
            :||:|.:.:||:|:           ::..::.:..:.  .|||:|||||||:..:|.   .|...
plant     6 LTILLATVLFLILR-----------IFSHRRNRSHNNRLPPGPNPWPIIGNLPHMGT---KPHRT 56

  Fly    77 FGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPD-------FFRYHKL-FG-- 131
            ...:...||.|..|.||....:|..:..:.::.|..:...|..||.       .:.|..| |.  
plant    57 LSAMVTTYGPILHLRLGFVDVVVAASKSVAEQFLKIHDANFASRPPNSGAKHMAYNYQDLVFAPY 121

  Fly   132 GDRNNSLALCDWSQLQQKRRNLARRHCSPRESSSYFSKMSEIGGLEVNQLLDQLTNISSGYPCDV 196
            |.|...|.......|...:.....:|....|..:...::..:|...||  |.||.|:     |  
plant   122 GHRWRLLRKISSVHLFSAKALEDFKHVRQEEVGTLTRELVRVGTKPVN--LGQLVNM-----C-- 177

  Fly   197 KPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQGYSFDYIP---WL-VPFYCNH 257
              ::.|....|..:.:.....::....|:.::.....:....|.|   |::|   || :......
plant   178 --VVNALGREMIGRRLFGADADHKADEFRSMVTEMMALAGVFNIG---DFVPSLDWLDLQGVAGK 237

  Fly   258 ISRIVHWSASIRKF--ILERIVNHRESNININEPDKDFTDAL--LKSLK-----EDKNVSRNTII 313
            :.|: |     ::|  .|..|:...|    :|..|:..||.|  |.|||     .|.....:|.|
plant   238 MKRL-H-----KRFDAFLSSILKEHE----MNGQDQKHTDMLSTLISLKGTDLDGDGGSLTDTEI 292

  Fly   314 --FMLEDFIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNVMPYTMAS 376
              .:|..|..|.....:.|..|:|.:.::|.|.:..:.|:|.|..:. |.:...|:..:||..|.
plant   293 KALLLNMFTAGTDTSASTVDWAIAELIRHPDIMVKAQEELDIVVGRD-RPVNESDIAQLPYLQAV 356

  Fly   377 ISEVLR-YSSSPI-VPHVAMEDTVIKGFGVRKGTIVFINNYVLNMSESFWNHPEQFDPERFLENN 439
            |.|..| :..:|: :||:|.|...|.|:.:.||:.:..|.:.:......|:.|..|.|||||   
plant   357 IKENFRLHPPTPLSLPHIASESCEINGYHIPKGSTLLTNIWAIARDPDQWSDPLAFKPERFL--- 418

  Fly   440 FTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFLPFSVGKRTCIGQS 504
             ...::||:   |.|.::|                              :.:||..|:|.|.|.|
plant   419 -PGGEKSGV---DVKGSDF------------------------------ELIPFGAGRRICAGLS 449

  Fly   505 L-VRGFGFLLLANIIQNYN---VNSADFSKIKLEKSSIALPKKCFKLSLRPR 552
            | :|...| |.|.::|.::   .......|:.:|:|.....::...|.:.|:
plant   450 LGLRTIQF-LTATLVQGFDWELAGGVTPEKLNMEESYGLTLQRAVPLVVHPK 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 126/527 (24%)
TT7NP_196416.1 PLN02687 2..511 CDD:215371 133/572 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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