DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spok and CYP71B4

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001325927.1 Gene:CYP71B4 / 822231 AraportID:AT3G26280 Length:521 Species:Arabidopsis thaliana


Alignment Length:584 Identity:124/584 - (21%)
Similarity:228/584 - (39%) Gaps:131/584 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ITIILISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQ--APGPHPWPIIGNINLLGRFQYNPFYG 76
            |.:.|:|:..|||      ..:..||...||.:...|  .|||...|||||::.|....:...: 
plant    17 IMVSLLSFFLLLL------VPIFFLLIFTKKIKESKQNLPPGPAKLPIIGNLHQLQGLLHKCLH- 74

  Fly    77 FGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKE-------------------VLNKNGKYFGGRPD 122
              .|:||:|.:..|.||....:|:::.:..:|                   |.::|||..|    
plant    75 --DLSKKHGPVMHLRLGFAPMVVISSSEAAEEALKTHDLECCSRPITMASRVFSRNGKDIG---- 133

  Fly   123 FFRYHKLFG--GDRNNSLALCDWSQLQQKRRNLARRHCSPRESSSYFSKMSEIGGLEVNQLLDQL 185
                   ||  ||        :|.:|   |:...|...|.::..|:.....|...|.:.:|.:..
plant   134 -------FGVYGD--------EWREL---RKLSVREFFSVKKVQSFKYIREEENDLMIKKLKELA 180

  Fly   186 TNISSGYPCDVKPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQGYSF---DYI 247
            :..|   |.|:..::...:|::..:......| :.:|...:  |...|:.:|.....:|   |:.
plant   181 SKQS---PVDLSKILFGLTASIIFRTAFGQSF-FDNKHVDQ--ESIKELMFESLSNMTFRFSDFF 239

  Fly   248 P-----WLVPFYCNHISRIVHWSASIRKFILERIVNHRESNININEPDKDFTDALLKSLKEDKNV 307
            |     |.:.|......|:.:....:..|....:.:|.......:.|  |..||:|..:..::..
plant   240 PTAGLKWFIGFVSGQHKRLYNVFNRVDTFFNHIVDDHHSKKATQDRP--DMVDAILDMIDNEQQY 302

  Fly   308 SRNTIIFMLE-DFIGG------HSAVGN---LVMLALAYIAKNPTIALHIRNEVDT-VSAKGIRR 361
            :.    |.|. |.:.|      |:.:..   .::.|:|.:.:||.:....::|:.| :..|...|
plant   303 AS----FKLTVDHLKGVLSNIYHAGIDTSAITLIWAMAELVRNPRVMKKAQDEIRTCIGIKQEGR 363

  Fly   362 ICLYDMNVMPYTMASISEVLR-YSSSP-IVPHVAMEDTVIKGFGVRKGTIVFINNYVLNMSESFW 424
            |...|::.:.|....:.|.|| :.::| ::|...|.|..|:|:.:.:...:.:|.:.:......|
plant   364 IMEEDLDKLQYLKLVVKETLRLHPAAPLLLPRETMADIKIQGYDIPQKRALLVNAWSIGRDPESW 428

  Fly   425 NHPEQFDPERFLENNFTNNKESGLKCD-DNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIP 488
            .:||:|:||||::            |. |.|...|                              
plant   429 KNPEEFNPERFID------------CPVDYKGHSF------------------------------ 451

  Fly   489 QFLPFSVGKRTCIGQSLVRGFGFLLLANIIQNYNVNSADFSK-IKLEKSSIALPKKCFKLSLRP 551
            :.|||..|:|.|.|.::......|.|.|::..::.|..:..| :.:|::......|...|.|.|
plant   452 ELLPFGSGRRICPGIAMAIATIELGLLNLLYFFDWNMPEKKKDMDMEEAGDLTVDKKVPLELLP 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 111/540 (21%)
CYP71B4NP_001325927.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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