DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spok and Cyp2d26

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_083838.1 Gene:Cyp2d26 / 76279 MGIID:1923529 Length:500 Species:Mus musculus


Alignment Length:537 Identity:126/537 - (23%)
Similarity:230/537 - (42%) Gaps:100/537 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IILISYVFLLLKCKQKAFVVIGLLYQEKKY-QCFDQAPGPHPWPIIGNINLLGRFQYNPFYGFGT 79
            :::.:.:||||         :.|:::.::: .|:  .|||.|:|.:||: |...|:..| |.|..
Mouse    12 VVIFTAIFLLL---------VDLVHRRQRWTACY--PPGPVPFPGLGNL-LQVDFENIP-YSFYK 63

  Fly    80 LTKKYGDIYSLSLGHTRCIVVNNVDLIKEVLNKNGKYFGGRPDFFRYHKLFGGDRNNSLALC--- 141
            |..:||:::||.:.....:|||.:..::|:|...|:....||....|:.:..|.::..:.|.   
Mouse    64 LQNRYGNVFSLQMAWKPVVVVNGLKAVRELLVTYGEDTSDRPLMPIYNHIGYGHKSKGVILAPYG 128

  Fly   142 -DWSQLQQKRRNLARRHCSPRESSSYFSKMSEIGGLEVNQLLDQLTNISSGYPCDVKPLILAASA 205
             :|.  :|:|.:::..........|....::|    |...|.|..|. .:.:|.:..||:..|.:
Mouse   129 PEWR--EQRRFSVSTLRDFGLGKKSLEQWVTE----EAGHLCDAFTK-EAEHPFNPSPLLSKAVS 186

  Fly   206 NMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEIN--QGYSFDYIPWLVPFYCNHI--------SR 260
            |:....:.:.||.|.|..|.::::...|...|..  .|...:.||.|:     ||        .:
Mouse   187 NVIASLIYARRFEYEDPFFNRMLKTLKESLGEDTGFVGEVLNAIPMLL-----HIPGLPDKAFPK 246

  Fly   261 IVHWSASIRKFILERIVNHRESNININEPDKDFTDALLKSLKEDKN------VSRNTIIFMLEDF 319
            :..:.|.:.|.::|     .:|..:..:|.:|.|||.|..:::.|.      ..:|..|.:::.|
Mouse   247 LNSFIALVNKMLIE-----HDSTWDPAQPPRDLTDAFLAEVEKAKGNPESSFNDKNLRIVVIDLF 306

  Fly   320 IGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNVMPYTMASISEVLRYS 384
            :.|.......:..||..:..:|.:...:..|:|.|... :|...:.|...||||.|.|.||.|::
Mouse   307 MAGMVTTSTTLSWALLLMILHPDVQRRVHQEIDEVIGH-VRHPEMADQARMPYTNAVIHEVQRFA 370

  Fly   385 SSPIV----PHVAMEDTVIKGFGVRKGTIVFINNYVLNMSESFWNHPEQFDPERFLENNFTNNKE 445
            .  ||    ||:...|...:.|.:.|||.:..|...:...|:.|..|.:|.||.||:        
Mouse   371 D--IVPTNLPHMTSRDIKFQDFFIPKGTTLIPNLSSVLKDETVWEKPLRFYPEHFLD-------- 425

  Fly   446 SGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFLPFSVGKRTCIGQSLVRGFG 510
                    .:..|::..                          .|:|||.|:|:|:|:.|.|...
Mouse   426 --------AQGHFVKHE--------------------------AFMPFSAGRRSCLGEPLARMEL 456

  Fly   511 FLLLANIIQNYNVNSAD 527
            ||....::|.::.:..|
Mouse   457 FLFFTCLLQRFSFSVPD 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 120/500 (24%)
Cyp2d26NP_083838.1 p450 37..496 CDD:278495 120/501 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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