DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment spok and Cyp2s1

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_083051.1 Gene:Cyp2s1 / 74134 MGIID:1921384 Length:501 Species:Mus musculus


Alignment Length:574 Identity:136/574 - (23%)
Similarity:231/574 - (40%) Gaps:127/574 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SVFYVLFAIAITIILISYVFLLLKCKQKAFVVIGLLYQEKKYQCFDQAPGPHPWPIIGNINLLGR 68
            |.:.:|.|:.:.::|:|  ..|.:...:.::                .|||.|.|::||:     
Mouse     5 STWALLLALLLLLLLLS--LTLFRTPARGYL----------------PPGPTPLPLLGNL----- 46

  Fly    69 FQYNP---FYGFGTLTKKYGDIYSLSLG-HTRCIVVNNVDLIKEVLNKNGKYFGGRPDFFRYHKL 129
            .|..|   :.|...|:||||.::::.|| ..|.:|:...|.::|.|....:.|.||.......|.
Mouse    47 LQLRPGALYSGLLRLSKKYGPVFTVYLGPWRRVVVLVGHDAVREALGGQAEEFSGRGTLATLDKT 111

  Fly   130 F--------GGDRNNSLALCDWSQLQQKRRNLARRH--CSPRESSSYFSKMSEIGGLEVNQLLDQ 184
            |        .|:|        |.|| :|...||.|.  ...||.       .|:...||..|::.
Mouse   112 FDGHGVFFANGER--------WKQL-RKFTLLALRDLGMGKREG-------EELIQAEVQSLVEA 160

  Fly   185 LTNISSGYPCDVKPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIFWEINQ--GYSFDYI 247
            ... :.|.|.:...|:..|::|:.|..:..:|..|.||.||.:|:........|:.  |.:::..
Mouse   161 FQK-TEGRPFNPSMLLAQATSNVVCSLVFGIRLPYDDKEFQAVIQAASGTLLGISSPWGQAYEMF 224

  Fly   248 PWLV-PFYCNHISRIVHWSASIRKFILERIVNHRESNININEPDKDFTDALLKSLKEDKN----- 306
            .||: |....| :::.|...::..|.::::..| :.....:.|.:|..||.|..:.::|.     
Mouse   225 SWLLQPLPGPH-TQLQHHLGTLAAFTIQQVQKH-QGRFQTSGPARDVVDAFLLKMAQEKQDPGTE 287

  Fly   307 -VSRNTIIFMLEDFIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVSAKGIRRICLYDMNVM 370
             ..:|.::.:......|...:|..:..||..:.:.|.:...:|.|:......| |...|.|...:
Mouse   288 FTEKNLLMTVTYLLFAGTMTIGATIRYALLLLLRYPQVQQRVREELIQELGPG-RAPSLSDRVRL 351

  Fly   371 PYTMASISEVLR-YSSSPI-VPHVAMEDTVIKGFGVRKGTIVF-INNYVLNMSESFWNHPEQFDP 432
            |||.|.:.|..| .:..|: :||.....|..:|:.:.|||.|| :...:|:....|.| |.:|.|
Mouse   352 PYTDAVLHEAQRLLALVPMGMPHTITRTTCFRGYTLPKGTEVFPLIGSILHDPAVFQN-PGEFHP 415

  Fly   433 ERFLENNFTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKLLKKSIPQFLPFSVGK 497
            .|||                          |.||..:..:                .|||:|:||
Mouse   416 GRFL--------------------------DEDGRLRKHE----------------AFLPYSLGK 438

  Fly   498 RTCIGQSLVRGFGFLLLANIIQNYNVNSADFSKIKLEKSSIALPKKCFKLSLRP 551
            |.|:|:.|.|...:|...:|:|.:               |:..|.....|||:|
Mouse   439 RVCLGEGLARAELWLFFTSILQAF---------------SLETPCPPGDLSLKP 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 127/522 (24%)
Cyp2s1NP_083051.1 p450 50..487 CDD:365848 122/506 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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