DRSC/TRiP Functional Genomics Resources

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Protein Alignment spok and Cyp2c55

DIOPT Version :9

Sequence 1:NP_001104460.2 Gene:spok / 5740359 FlyBaseID:FBgn0086917 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_082365.1 Gene:Cyp2c55 / 72082 MGIID:1919332 Length:490 Species:Mus musculus


Alignment Length:498 Identity:130/498 - (26%)
Similarity:226/498 - (45%) Gaps:92/498 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PGPHPWPIIGNI------NLLGRFQYNPFYGFGTLTKKYGDIYSLSLGHTRCIVVNNVDLIKEVL 110
            |||.|:||||||      |:...|.|        .:|.||.:::|..|....:||:..:.:||.|
Mouse    31 PGPTPFPIIGNILQIDIKNISKSFNY--------FSKVYGPVFTLYFGSKPTVVVHGYEAVKEAL 87

  Fly   111 NKNGKYFGGRPDFFRYHKLFGGDRNNSLAL-----CDWSQLQQKRRNLARRHCSPRESSSYFSKM 170
            :..|:.|.||..|..:.::     ||.|.:     ..|.:|  :|.::...........|...::
Mouse    88 DDLGEEFSGRGSFQIFERI-----NNDLGVIFSNGTKWKEL--RRFSIMTLRSFGMGKRSIEDRI 145

  Fly   171 SEIGGLEVNQLLDQLTNISSGYPCDVKPLILAASANMFCQYMCSVRFNYSDKGFQKIIEYFDEIF 235
            .|    |.:.|:::|.. ::|..||...::..|.:|:.|..:...||:|.|:.|..::|..:|.|
Mouse   146 QE----EASCLVEELRK-ANGSLCDPTFILSCAPSNVICSVIFHNRFDYKDEKFLNLMERLNENF 205

  Fly   236 WEINQGYS--FDYIPWLVPFYCNHISRIVHWSASIRKFILERIVNHRESNININEPDKDFTDALL 298
            ..:|..:.  ::.:|.|:.:.....::::.....|:.:||.|:..|:|: ::::.| :||.|..|
Mouse   206 KILNSPWMQVYNALPTLINYLPGSHNKVIKNFTEIKSYILGRVKEHQET-LDMDNP-RDFIDCFL 268

  Fly   299 KSLKEDKNVSRNTIIFMLED--------FIGGHSAVGNLVMLALAYIAKNPTIALHIRNEVDTVS 355
            ..::::|:...:.  |.:|.        |:.|.......:...|..:.|:..:...::.|:|.|.
Mouse   269 IKMEQEKHNPHSE--FTIESLMATVTDIFVAGTETTNITLRYGLLLLLKHTEVTAKVQAEIDHVI 331

  Fly   356 AKGIRRICLYDMNVMPYTMASISEVLRYSS--SPIVPHVAMEDTVIKGFGVRKGT-IVFINNYVL 417
            .:. |..|:.|...||||.|.:.|:.||..  ...|||.|..:...:.:.:.||| :|.....||
Mouse   332 GRH-RSPCMQDRTRMPYTDAMVHEIQRYIDLIPNNVPHAATCNVRFRSYFIPKGTELVTSLTSVL 395

  Fly   418 NMSESFWNHPEQFDPERFLENNFTNNKESGLKCDDNKRTEFIRKNDNDGSTKSKKYGKQNLNNKL 482
            :..:.|.| ||.|||..||:.|                          |:.|...|         
Mouse   396 HDDKEFPN-PEVFDPGHFLDEN--------------------------GNFKKSDY--------- 424

  Fly   483 LKKSIPQFLPFSVGKRTCIGQSLVRGFGFLLLANIIQNYNVNS 525
                   |:|||:|||.|:|::|.|...||:|..|:||:|:.|
Mouse   425 -------FMPFSIGKRMCVGEALARTELFLILTTILQNFNLKS 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spokNP_001104460.2 p450 52..549 CDD:299894 130/498 (26%)
Cyp2c55NP_082365.1 p450 30..485 CDD:278495 130/498 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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